metacyc_reference: MetaCyc Pathway Reference Dataset
In ggpicrust2: Make 'PICRUSt2' Output Analysis and Visualization Easier
metacyc_reference R Documentation
MetaCyc Pathway Reference Dataset
Description
A reference dataset mapping MetaCyc pathway identifiers to their descriptions.
Used internally by ggpicrust2 for annotating MetaCyc pathway analysis results.
Usage
data("metacyc_reference")
Format
A data frame with 2714 observations and the following columns:
idCharacter. MetaCyc pathway identifier (e.g., "GLYCOLYSIS", "TCA")
descriptionCharacter. Human-readable pathway description
Source
MetaCyc database (https://metacyc.org)
Examples
data("metacyc_reference")
head(metacyc_reference)
ggpicrust2 documentation built on April 10, 2026, 5:06 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| metacyc_reference | R Documentation |
MetaCyc Pathway Reference Dataset
Description
A reference dataset mapping MetaCyc pathway identifiers to their descriptions. Used internally by ggpicrust2 for annotating MetaCyc pathway analysis results.
Usage
data("metacyc_reference")Format
A data frame with 2714 observations and the following columns:
idCharacter. MetaCyc pathway identifier (e.g., "GLYCOLYSIS", "TCA")
descriptionCharacter. Human-readable pathway description
Source
MetaCyc database (https://metacyc.org)
Examples
data("metacyc_reference")
head(metacyc_reference)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.