kegg_pathway_reference: KEGG Pathway Name Reference Dataset

In ggpicrust2: Make 'PICRUSt2' Output Analysis and Visualization Easier

KEGG Pathway Name Reference Dataset

Description

A reference dataset mapping KEGG pathway IDs to their human-readable names. Used internally by ggpicrust2 for pathway annotation in DAA and GSEA results.

Usage

data("kegg_pathway_reference")

Format

A data frame with 505 observations and the following columns:

pathway

Character. KEGG pathway ID in the format "koXXXXX" (e.g., "ko00010")

pathway_name

Character. Human-readable pathway name (e.g., "Glycolysis / Gluconeogenesis")

Source

KEGG REST API (https://rest.kegg.jp)

Examples

data("kegg_pathway_reference")
head(kegg_pathway_reference)

ggpicrust2 documentation built on April 10, 2026, 5:06 p.m.