layer_geoms: Layer geometry display

In ggplot2: Create Elegant Data Visualisations Using the Grammar of Graphics

Layer geometry display

Description

In ggplot2, a plot in constructed by adding layers to it. A layer consists of two important parts: the geometry (geoms), and statistical transformations (stats). The 'geom' part of a layer is important because it determines the looks of the data. Geoms determine how something is displayed, not what is displayed.

Specifying geoms

There are five ways in which the 'geom' part of a layer can be specified.

# 1. The geom can have a layer constructor
geom_area()

# 2. A stat can default to a particular geom
stat_density() # has `geom = "area"` as default

# 3. It can be given to a stat as a string
stat_function(geom = "area")

# 4. The ggproto object of a geom can be given
stat_bin(geom = GeomArea)

# 5. It can be given to `layer()` directly
layer(
  geom = "area",
  stat = "smooth",
  position = "identity"
)

Many of these ways are absolutely equivalent. Using stat_density(geom = "line") is identical to using geom_line(stat = "density"). Note that for layer(), you need to provide the "position" argument as well. To give geoms as a string, take the function name, and remove the geom_ prefix, such that geom_point becomes "point".

Some of the more well known geoms that can be used for the geom argument are: "point", "line", "area", "bar" and "polygon".

Graphical display

A ggplot is build on top of the grid package. This package understands various graphical primitives, such as points, lines, rectangles and polygons and their positions, as well as graphical attributes, also termed aesthetics, such as colours, fills, linewidths and linetypes. The job of the geom part of a layer, is to translate data to grid graphics that can be plotted.

To see how aesthetics are specified, run vignette("ggplot2-specs"). To see what geom uses what aesthetics, you can find the Aesthetics section in their documentation, for example in ?geom_line.

While almost anything can be represented by polygons if you try hard enough, it is not always convenient to do so manually. For this reason, the geoms provide abstractions that take most of this hassle away. geom_ribbon() for example is a special case of geom_polygon(), where two sets of y-positions have a shared x-position. In turn, geom_area() is a special case of a ribbon, where one of the two sets of y-positions is set at 0.

# A hassle to build a polygon
my_polygon <- data.frame(
  x = c(economics$date,    rev(economics$date)),
  y = c(economics$uempmed, rev(economics$psavert))
)
ggplot(my_polygon, aes(x, y)) +
  geom_polygon()

# More succinctly
ggplot(economics, aes(date)) +
  geom_ribbon(aes(ymin = uempmed, ymax = psavert))

In addition to abstraction, geoms sometimes also perform composition. A boxplot is a particular arrangement of lines, rectangles and points that people have agreed upon is a summary of some data, which is performed by geom_boxplot().

Boxplot data
value <- fivenum(rnorm(100))
df <- data.frame(
  min = value[1], lower = value[2], middle = value[3],
  upper = value[4], max = value[5]
)

# Drawing a boxplot manually
ggplot(df, aes(x = 1, xend = 1)) +
  geom_rect(
    aes(
      xmin = 0.55, xmax = 1.45,
      ymin = lower, ymax = upper
    ),
    colour = "black", fill = "white"
  ) +
  geom_segment(
    aes(
      x = 0.55, xend = 1.45,
      y = middle, yend = middle
    ),
    size = 1
  ) +
  geom_segment(aes(y = lower, yend = min)) +
  geom_segment(aes(y = upper, yend = max))

# More succinctly
ggplot(df, aes(x = 1)) +
  geom_boxplot(
    aes(ymin = min, ymax = max,
        lower = lower, upper = upper,
        middle = middle),
    stat = "identity"
  )

Under the hood

Internally, geoms are represented as ggproto classes that occupy a slot in a layer. All these classes inherit from the parental Geom ggproto object that orchestrates how geoms work. Briefly, geoms are given the opportunity to draw the data of the layer as a whole, a facet panel, or of individual groups. For more information on extending geoms, see the Creating a new geom section after running vignette("extending-ggplot2"). Additionally, see the New geoms section of the online book.

See Also

For an overview of all geom layers, see the online reference.

Other layer documentation: layer(), layer_positions, layer_stats

ggplot2 documentation built on June 22, 2024, 11:35 a.m.