computeCounts: Compute counts for emissions and transitions.
In gphmm: Generalized Pair Hidden Markov Chain Model for Sequence Alignment
Description
Usage
Arguments
Examples
Description
computeCounts returns a list with emission and transition counts.
Usage
1
computeCounts(gphmm)
Arguments
gphmm
- output of computegphmm with arg output='long'.
Examples
1
2
gphmmOut <- computegphmm('ATCG', 'ATG', output = 'long')
computeCounts(gphmmOut)
gphmm documentation built on Oct. 2, 2017, 5:03 p.m.
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Description Usage Arguments Examples
Description
computeCounts returns a list with emission and transition counts.
Usage
1 | computeCounts(gphmm)
|
Arguments
gphmm |
- output of computegphmm with arg output='long'. |
Examples
1 2 | gphmmOut <- computegphmm('ATCG', 'ATG', output = 'long')
computeCounts(gphmmOut)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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