tests/testthat/_snaps/as_hux_table.md

In gtsummary: Presentation-Ready Data Summary and Analytic Result Tables

tbl_summary

Code
  tbl
Output
                     Characteristic                N = 200       
                   ──────────────────────────────────────────────
                     Chemotherapy Treatment                      
                     Drug A                       98 (49%)       
                     Drug B                       102 (51%)      
                     Age                         47 (38, 57)     
                     Unknown                         11          
                     Marker Level (ng/mL)     0.64 (0.22, 1.39)  
                     Unknown                         10          
                     T Stage                                     
                     T1                           53 (27%)       
                     T2                           54 (27%)       
                     T3                           43 (22%)       
                     T4                           50 (25%)       
                     Grade                                       
                     I                            68 (34%)       
                     II                           68 (34%)       
                     III                          64 (32%)       
                     Tumor Response               61 (32%)       
                     Unknown                          7          
                     Patient Died                 112 (56%)      
                     Months to Death/Censor   22.4 (16.0, 24.0)  
                   ──────────────────────────────────────────────
                     n (%); Median (IQR)

  Column names: label, stat_0

Code
  tbl
Output
                        Characteristic             N = 200    
                      ────────────────────────────────────────
                        Chemotherapy Treatment                
                        Drug A                    98 (49%)    
                        Drug B                    102 (51%)   
                        Age                      47 (38, 57)  
                        Unknown                      11       
                      ────────────────────────────────────────
                        n (%); Median (IQR)                   
                        test footnote

  Column names: label, stat_0

Code
  tbl
Output
                            Characteristic    N = 5,000   
                          ────────────────────────────────
                            age              47 (38, 57)  
                            Unknown              275      
                            trt                           
                            Drug A           2,450 (49%)  
                            Drug B           2,550 (51%)  
                          ────────────────────────────────
                            Median (IQR); n (%)

  Column names: label, stat_0

tbl_cross

Code
  tbl
Output
                                        Grade                  
                                       I    II    III   Total  
                     ──────────────────────────────────────────
                       Chemotherapy                            
                       Treatment                               
                       Drug A         35    32    31     98    
                       Drug B         33    36    33     102   
                       Total          68    68    64     200

  Column names: label, stat_1, stat_2, stat_3, stat_0

tbl_regression

Code
  tbl
Output
                   Characteristic   Beta     95% CI      p-value  
                 ─────────────────────────────────────────────────
                   Age              0.00   -0.01, 0.01    >0.9    
                 ─────────────────────────────────────────────────
                   CI = Confidence Interval

  Column names: label, estimate, ci, p.value

tbl_uvregression

Code
  tbl
Output
                 Characterist    N    Beta      95% CI      p-value  
                 ic                                                  
               ──────────────────────────────────────────────────────
                 Chemotherapy   189                                  
                 Treatment                                           
                 Drug A                 —          —                 
                 Drug B               0.44     -3.7, 4.6      0.8    
                 Marker Level   179   -0.05    -2.5, 2.4     >0.9    
                 (ng/mL)                                             
                 T Stage        189                                  
                 T1                     —          —                 
                 T2                    1.3     -4.2, 6.9      0.6    
                 T3                    2.6     -3.3, 8.6      0.4    
                 T4                   -2.0     -7.8, 3.8      0.5    
                 Grade          189                                  
                 I                      —          —                 
                 II                    1.4     -3.6, 6.4      0.6    
                 III                   2.0     -3.1, 7.0      0.4    
                 Tumor          183    3.8    -0.66, 8.3     0.094   
                 Response                                            
                 Patient Died   189    2.2     -2.0, 6.3      0.3    
                 Months to      189   -0.14   -0.54, 0.26     0.5    
                 Death/Censor                                        
               ──────────────────────────────────────────────────────
                 CI = Confidence Interval

  Column names: label, stat_n, estimate, ci, p.value

tbl_survfit

Code
  tbl
Output
              Characteristic             12 Months        24 Months     
            ────────────────────────────────────────────────────────────
              Chemotherapy Treatment                                    
              Drug A                   91% (85%, 97%)   47% (38%, 58%)  
              Drug B                   86% (80%, 93%)   41% (33%, 52%)

  Column names: label, stat_1, stat_2

tbl_merge/tbl_stack

Code
  tbl
Output
                       Tumor Response               Time to Death           
          Characte    OR     95% CI    p-value    HR     95% CI    p-value  
          ristic                                                            
        ────────────────────────────────────────────────────────────────────
          Chemothe                                                          
          rapy                                                              
          Treatmen                                                          
          t                                                                 
          Drug A      —        —                  —        —                
          Drug B     1.13    0.60,       0.7     1.30    0.88,       0.2    
                              2.13                        1.92              
          Grade                                                             
          I           —        —                  —        —                
          II         0.85    0.39,       0.7     1.21    0.73,       0.5    
                              1.85                        1.99              
          III        1.01    0.47,      >0.9     1.79    1.12,      0.014   
                              2.15                        2.86              
          Age        1.02    1.00,      0.10     1.01    0.99,       0.3    
                              1.04                        1.02              
        ────────────────────────────────────────────────────────────────────
          OR = Odds Ratio, CI = Confidence Interval, HR                     
          = Hazard Ratio

  Column names: label, estimate_1, ci_1, p.value_1, estimate_2, ci_2, p.value_2

Code
  tbl
Output
             Group          Characterist    OR      95% CI     p-value  
                            ic                                          
           ─────────────────────────────────────────────────────────────
             **Tumor        Chemotherapy                                
             Response**     Treatment                                   
                            Drug A          —         —                 
                            Drug B         1.13   0.60, 2.13     0.7    
                            Grade                                       
                            I               —         —                 
                            II             0.85   0.39, 1.85     0.7    
                            III            1.01   0.47, 2.15    >0.9    
                            Age            1.02   1.00, 1.04    0.10    
             **Time to      Chemotherapy                                
             Death**        Treatment                                   
                            Drug A          —         —                 
                            Drug B         1.30   0.88, 1.92     0.2    
                            Grade                                       
                            I               —         —                 
                            II             1.21   0.73, 1.99     0.5    
                            III            1.79   1.12, 2.86    0.014   
                            Age            1.01   0.99, 1.02     0.3    
           ─────────────────────────────────────────────────────────────
             OR = Odds Ratio, CI = Confidence Interval

  Column names: groupname_col, label, estimate, ci, p.value

gtsummary documentation built on July 26, 2023, 5:27 p.m.