summary.haplo.glm: Print and summary of a haplo.glm object

In haplo.stats: Statistical Analysis of Haplotypes with Traits and Covariates when Linkage Phase is Ambiguous

Print and summary of a haplo.glm object

Description

Do print and summary as in regular glm, then display extra information on haplotypes used in the model fit

Usage

## S3 method for class 'haplo.glm'
summary(object, show.all.haplo=FALSE,
                            show.missing=FALSE, ...)
## S3 method for class 'summary.haplo.glm'
print(x, digits = max(getOption("digits")-3,3), ...)

Arguments

x	A haplo.glm object
object	A haplo.glm object
show.all.haplo	Logical. If TRUE, print all haplotypes considered in the model.
show.missing	Logical. If TRUE, print number of rows removed because of missing values (NA) in y or x-covariates, or all alleles missing in geno
digits	Number of numeric digits to print.
...	Optional arguments for summary method

Details

Uses print.glm for the first section, then prints information on the haplotypes.

Value

If print is assigned, the object contains a list with the coefficient and haplotype data.frames which are printed by the method.

See Also

haplo.glm

haplo.stats documentation built on May 29, 2024, 9:53 a.m.