ifcb_get_shark_colnames: Get Shark Column Names

In iRfcb: Tools for Managing Imaging FlowCytobot (IFCB) Data

Get Shark Column Names

Description

This function reads SHARK column names from a specified tab-separated values (TSV) file included in the package. These columns are used for submitting IFCB data to https://shark.smhi.se/.

Usage

ifcb_get_shark_colnames(minimal = FALSE)

Arguments

minimal

A logical value indicating whether to load only the minimal set of column names required for data submission to SHARK. Default is FALSE.

Details

For a detailed example of a data submission, see ifcb_get_shark_example.

Value

An empty data frame containing the SHARK column names.

See Also

ifcb_get_shark_example

Examples

shark_colnames <- ifcb_get_shark_colnames()
print(shark_colnames)

shark_colnames_minimal <- ifcb_get_shark_colnames(minimal = TRUE)
print(shark_colnames_minimal)

iRfcb documentation built on April 16, 2025, 1:09 a.m.