Description Usage Arguments Value Author(s) Examples
These functions are used to extract only the unique sequences from a set of DNA reads, with the ability to rebuild the original sequence set at a later time.
1 2 3 | dereplicate(x, cores = 1)
rereplicate(x)
|
x |
a list of sequences in |
cores |
integer giving the number of processors for multithreading (defaults to 1).
This argument may alternatively be a 'cluster' object,
in which case it is the user's responsibility to close the socket
connection at the conclusion of the operation,
e.g. by running |
either a DNAbin/AAbin object, or a vector of concatenated upper-case character strings, depending on the input object.
Shaun Wilkinson
1 2 3 | data(whales)
tmp <- dereplicate(whales)
whales <- rereplicate(tmp)
|
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