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confint.ivmodel <- function(object, parm,level=NULL, ...){
ivmodel = object
alpha=ivmodel$alpha
if(!is.null(level)){
if(!is.numeric(level) | level>1 | level<0){
print("Wrong input of confidence level!")
return()
}else{
alpha=1-level
}
}
temp<-coef(ivmodel)
result<-matrix(NA, ncol=2, nrow=nrow(temp))
colnames(result)<-c(paste(round(alpha/2*100, digits=2), "%", sep=""),
paste(round((1-alpha/2)*100, digits=2), "%", sep=""))
rownames(result)<-rownames(temp)
index<-rownames(temp)=="k-class"
rownames(result)[index]<-paste("k-class", round(temp[index, 1], digits=2))
result[,1]<-temp[,2]+temp[,3]*qt(alpha/2, df=ivmodel$n-ivmodel$p-1)
result[,2]<-temp[,2]+temp[,3]*qt(1-alpha/2, df=ivmodel$n-ivmodel$p-1)
if(!is.null(ivmodel$AR)){
if(alpha!=ivmodel$alpha){
temp=AR.test(ivmodel, beta0=ivmodel$beta0, alpha=alpha)
}else{
temp=ivmodel$AR
}
if(nrow(temp$ci)==1){
rownames(temp$ci)<-"AR"
}else{
rownames(temp$ci)<-paste("AR(part", 1:nrow(temp$ci), ")", sep="")
}
result<-rbind(result, temp$ci)
}
if(!is.null(ivmodel$ARsens)){
if(alpha!=ivmodel$alpha){
temp=ARsens.test(ivmodel, beta0=ivmodel$beta0, alpha=alpha,
deltarange=ivmodel$ARsens$deltarange)
}else{
temp=ivmodel$ARsens
}
if(nrow(temp$ci)==1){
rownames(temp$ci)<-"Sensitivity Analysis"
}else{
rownames(temp$ci)<-paste("Sensitivity Analysis(part", 1:nrow(temp$ci), ")", sep="")
}
result<-rbind(result, temp$ci)
}
if(!is.null(ivmodel$CLR)){
if(alpha!=ivmodel$alpha){
temp=CLR(ivmodel, beta0=ivmodel$beta0, alpha=alpha)
}else{
temp=ivmodel$CLR
}
if(nrow(temp$ci)==1){
rownames(temp$ci)<-"CLR"
}else{
rownames(temp$ci)<-paste("CLR(part", 1:nrow(temp$ci), ")", sep="")
}
result<-rbind(result, temp$ci)
}
return(result)
}
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