plot.kda: Plot for kernel discriminant analysis

In ks: Kernel Smoothing

Plot for kernel discriminant analysis

Description

Plot for kernel discriminant analysis for 1- to 3-dimensional data.

Usage

## S3 method for class 'kda'
plot(x, y, y.group, ...)

Arguments

x	object of class kda (output from kda)
y	matrix of test data points
y.group	vector of group labels for test data points
...	other graphics parameters: rugsize height of rug-like plot for partition classes (1-d) prior.prob vector of prior probabilities col.part vector of colours for partition classes (1-d, 2-d) and those used in plot.kde

Details

For kda objects, the function headers for the different dimensional data are

  ## univariate
  plot(x, y, y.group, prior.prob=NULL, xlim, ylim, xlab, 
       ylab="Weighted density function", drawpoints=FALSE, col, col.fun, 
       col.part, col.pt, lty, jitter=TRUE, rugsize, add=FALSE, alpha=1, ...)

  ## bivariate
  plot(x, y, y.group, prior.prob=NULL, display.part="filled.contour",
       cont=c(25,50,75), abs.cont, approx.cont=TRUE, xlim, ylim, xlab, ylab,
       drawpoints=FALSE, drawlabels=TRUE, cex=1, pch, lty, part=TRUE, col, 
       col.fun, col.part, col.pt, alpha=1, lwd=1, lwd.part=0, add=FALSE, ...)

  ## trivariate
  plot(x, y, y.group, prior.prob=NULL, display="plot3D", cont=c(25,50,75), 
       abs.cont, approx.cont=TRUE, colors, col, col.fun, col.pt, alpha=0.5, 
       alphavec, xlab, ylab, zlab, drawpoints=FALSE, size=3, cex=1, pch, 
       theta=-30, phi=40, d=4, ticktype="detailed", bty="f", add=FALSE, ...)

Value

Plots for 1-d and 2-d are sent to graphics window. Plot for 3-d is sent to graphics/RGL window.

See Also

kda, kde

Examples

data(iris)

## univariate example
ir <- iris[,1]
ir.gr <- iris[,5]
kda.fhat <- kda(x=ir, x.group=ir.gr, xmin=3, xmax=9)
plot(kda.fhat, xlab="Sepal length")

## bivariate example
ir <- iris[,1:2]
ir.gr <- iris[,5]
kda.fhat <- kda(x=ir, x.group=ir.gr)
plot(kda.fhat, alpha=0.2, drawlabels=FALSE)

## trivariate example
ir <- iris[,1:3]
ir.gr <- iris[,5]
kda.fhat <- kda(x=ir, x.group=ir.gr)
plot(kda.fhat) 
   ## colour=species, transparency=density heights

ks documentation built on Sept. 30, 2024, 9:15 a.m.