setDispersalHost: Set host dispersal

In landsepi: Landscape Epidemiology and Evolution

Set host dispersal

Description

Updates a LandsepiParams object with a host dispersal matrix.

Usage

setDispersalHost(params, mat)

Arguments

params	a LandsepiParams Object.
mat	a square matrix giving the probability of host dispersal from any field of the landscape to any other field. It can be generated manually, or, alternatively, via loadDispersalHost. The size of the matrix must match the number of fields in the landscape.

Details

the dispersal matrix gives the probability for a host individual in a field i (row) to migrate to field j (column) through dispersal. If the host is a cultivated plant: seeds are harvested and do not disperse. Thus the dispersal matrix is the identity matrix.

Value

a LandsepiParam object.

See Also

loadDispersalHost

Examples

## Not run: 
simul_params <- createSimulParams()
simul_params <- setLandscape(simul_params, loadLandscape(1))
d <- loadDispersalHost(simul_params)
simul_params <- setDispersalHost(simul_params, d)
simul_params@DispHost

## End(Not run)

landsepi documentation built on July 26, 2023, 5:36 p.m.