updateReproSexProb: Update the probability of sexual reproduction

In landsepi: Landscape Epidemiology and Evolution

Update the probability of sexual reproduction

Description

set the probabilities for an infectious host to reproduce via sex rather than via cloning at every time step. Note that time parameters must be set before updating sexual reproduction probabilities.

Usage

updateReproSexProb(params, vec)

Arguments

params	a LandsepiParams object
vec	a vector of size TimeParam$nTSpY +1 (season end) with the probabilities for an infectious host to reproduce via sex rather than via cloning at each time step.

Value

a LandsepiParams object updated

Examples

## Not run: 
simul_params <- createSimulParams()
simul_params <- setTime(simul_params, Nyears=10, nTSpY=120)
simul_params <- setPathogen(simul_params, loadPathogen("rust"))
repro_sex_probs <- c(rep(0.0, 120), 1.0)  
simul_params <- updateReproSexProb(simul_params, repro_sex_probs)
simul_params@Pathogen

## End(Not run)

landsepi documentation built on Sept. 23, 2024, 5:11 p.m.