block.obj: GenABEL Object with Genotype and Phenotype Data

In ldlasso: LD LASSO Regression for SNP Association Study

Description

This object is of class 'gwaa.data' from the package GenABEL. It contains both genotype and phenotype data in slots 'gtdata' and 'phdata' respectively. It is a small portion of a case-control genome-wide association study of Late-Onset Alzheimer's Disease performed at Mayo Clinic Florida.

Usage

block.obj

Format

An object of class 'gwaa.data' from the package GenABEL

References

Samuel Younkin, Joseph Nadeau, Robert Elston and J. Sunil Rao, "The Linkage Disequilibrium LASSO for SNP Selection in a Genetic Association Study of Late Onset Alzheimer Disease," Technical Report, 2010
Y.S. Aulchenko, S. Ripke, A. Isaacs, and C.M. van Duijn, "GenABEL: An R Library for Genome-wide Association Analysis," Bioinformatics, vol. 23(10), pp. 1294-1296, 2007

ldlasso documentation built on May 30, 2017, 3:05 a.m.