Description Usage Arguments Details Value Author(s)
This function creates a trace plot as a function of s2, the LD LASSO constraint
1 |
beta0.mat |
A matrix where rows are ld lasso estimates. This matrix has number of rows equal to length(s2.vec) and number of columns equal to the number of SNPs |
s2.vec |
The vector of s2 values used to generate the rows of beta0.mat |
type |
Type of plot, "l" for lines, "p" for points |
indx |
If index is NA then indx, is a vector of SNP indices to be plotted in red. |
s2star |
Value of s2star from cp object. If s2star is not NA, a vertical line is plotted at this value. |
abs |
A logical variable indicating whether to plot absolute value of beta instead of beta |
In this trace plot each line represents a SNP estimate and we see the behavior of the solution as the LD LASSO constraint is varied.
Creates a trace plot.
Samuel G. Younkin
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