plot_beta: Plot the LD LASSO solution by physical position.
In ldlasso: LD LASSO Regression for SNP Association Study
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Description
Creates a plot of LD LASSO estimates using the physical map, bpmap
Usage
1
Arguments
beta
A vector of ldlasso estimates.
bpmap
A vector of map positions in terms of kb from the left boundary
block.bounds.vec
A vector of block boundaries positions in kilobases from the left boundary.
Boundaries are plotted at the midpoint of SNP intervals.
Details
Includes haplotpye block boundaries as vertical broken lines.
Value
A plot object.
Author(s)
Samuel G. Younkin
See Also
plot_ldlasso
ldlasso documentation built on May 30, 2017, 3:05 a.m.
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Description Usage Arguments Details Value Author(s) See Also
Description
Creates a plot of LD LASSO estimates using the physical map, bpmap
Usage
1 |
Arguments
beta |
A vector of ldlasso estimates. |
bpmap |
A vector of map positions in terms of kb from the left boundary |
block.bounds.vec |
A vector of block boundaries positions in kilobases from the left boundary. Boundaries are plotted at the midpoint of SNP intervals. |
Details
Includes haplotpye block boundaries as vertical broken lines.
Value
A plot object.
Author(s)
Samuel G. Younkin
See Also
plot_ldlasso
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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