calculate_network_spikes: Compute the netwrok spikes statistics from spike lists.

In meaRtools: Micro-Electro Array (MEA) Analysis

Description

Taken a spike list object for a set of electrodes, this function searches network spikes returns a list of all network spikes.

Usage

calculate_network_spikes(e, sur = 100,ns_n, ns_t)

Arguments

e	A spike list object for a set of electrodes.
sur	This parameter is related to the number of datapoints to be used in summmarizing mean network spikes, which will be only used for network spike diagnostics. The default value of 100 will usually be sufficient.
ns_t	global variable, time window of a network spike
ns_n	global variable, minimum number of coincident electrodes

Value

Returns a list of object, containing network spikes.

wells	A list of wells that network spikes were found and defined.
ns_all	A list of network spikes computed from the spike lists.
well_layout	The plate/well layout identified by the function.

References

Need to find the paper describe this method.

meaRtools documentation built on May 1, 2019, 7:32 p.m.