parameters: A list of parameters with default values that user can...
In meaRtools: Micro-Electro Array (MEA) Analysis
Description
Usage
Format
Examples
Description
A list of parameters with default values that user can customize.
Usage
1
data("parameters")
Format
The format is:
List of 20
$ spike.csv : logi TRUE
$ spike.plot : logi TRUE
$ burst.csv : logi TRUE
$ burst.plot : logi TRUE
$ burst_type : chr "mi"
$ s_min : num 5
$ ns.csv : logi TRUE
$ ns.plot : logi TRUE
$ elec_min_rate : num 0.0167
$ elec_max_rate : num 1000
$ well_min_rate : num 0
$ mi_par :List of 5
..$ beg_isi : num 0.1
..$ end_isi : num 0.25
..$ min_ibi : num 0.8
..$ min_durn : num 0.05
..$ min_spikes: num 5
$ ns_t : num 0.01
$ ns_n : num 3
$ sur : num 100
$ burst_distribution_ibi :List of 7
..$ perform : num 1
..$ min_cases : num 15
..$ x_axis_lim : num 20
..$ bins_in_sec : num 5
..$ min_values : num 0
..$ filter_by_min: num 0
..$ per_well : num 0
$ burst_distribution_durn :List of 7
..$ perform : num 1
..$ min_cases : num 15
..$ x_axis_lim : num 18
..$ bins_in_sec : num 10
..$ min_values : num 0
..$ filter_by_min: num 0
..$ per_well : num 0
$ burst_distribution_isi :List of 7
..$ perform : num 1
..$ min_cases : num 15
..$ x_axis_lim : num 0.5
..$ bins_in_sec : num 100
..$ min_values : num 0
..$ filter_by_min: num 0
..$ per_well : num 0
$ burst_distribution_nspikes :List of 7
..$ perform : num 1
..$ min_cases : num 5
..$ x_axis_lim : num 200
..$ bins_in_sec : num 1
..$ min_values : num 0
..$ filter_by_min: num 0
..$ per_well : num 0
$ burst_distribution_spike_freq:List of 7
..$ perform : num 1
..$ min_cases : num 15
..$ x_axis_lim : num 300
..$ bins_in_sec : num 1
..$ min_values : num 0
..$ filter_by_min: num 0
..$ per_well : num 0
Examples
1
meaRtools documentation built on May 1, 2019, 7:32 p.m.
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Description Usage Format Examples
Description
A list of parameters with default values that user can customize.
Usage
1 | data("parameters")
|
Format
The format is: List of 20 $ spike.csv : logi TRUE $ spike.plot : logi TRUE $ burst.csv : logi TRUE $ burst.plot : logi TRUE $ burst_type : chr "mi" $ s_min : num 5 $ ns.csv : logi TRUE $ ns.plot : logi TRUE $ elec_min_rate : num 0.0167 $ elec_max_rate : num 1000 $ well_min_rate : num 0 $ mi_par :List of 5 ..$ beg_isi : num 0.1 ..$ end_isi : num 0.25 ..$ min_ibi : num 0.8 ..$ min_durn : num 0.05 ..$ min_spikes: num 5 $ ns_t : num 0.01 $ ns_n : num 3 $ sur : num 100 $ burst_distribution_ibi :List of 7 ..$ perform : num 1 ..$ min_cases : num 15 ..$ x_axis_lim : num 20 ..$ bins_in_sec : num 5 ..$ min_values : num 0 ..$ filter_by_min: num 0 ..$ per_well : num 0 $ burst_distribution_durn :List of 7 ..$ perform : num 1 ..$ min_cases : num 15 ..$ x_axis_lim : num 18 ..$ bins_in_sec : num 10 ..$ min_values : num 0 ..$ filter_by_min: num 0 ..$ per_well : num 0 $ burst_distribution_isi :List of 7 ..$ perform : num 1 ..$ min_cases : num 15 ..$ x_axis_lim : num 0.5 ..$ bins_in_sec : num 100 ..$ min_values : num 0 ..$ filter_by_min: num 0 ..$ per_well : num 0 $ burst_distribution_nspikes :List of 7 ..$ perform : num 1 ..$ min_cases : num 5 ..$ x_axis_lim : num 200 ..$ bins_in_sec : num 1 ..$ min_values : num 0 ..$ filter_by_min: num 0 ..$ per_well : num 0 $ burst_distribution_spike_freq:List of 7 ..$ perform : num 1 ..$ min_cases : num 15 ..$ x_axis_lim : num 300 ..$ bins_in_sec : num 1 ..$ min_values : num 0 ..$ filter_by_min: num 0 ..$ per_well : num 0
Examples
1 |
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