GetH0Items: GetH0Items
In metaGE: Meta-Analysis for Detecting Genotype x Environment Associations
GetH0Items R Documentation
GetH0Items
Description
This function give the index of the markers which seems not significant (under H0)
Usage
GetH0Items(Zmat, Threshold = 0.8, plotting = FALSE, Cores = NULL)
Arguments
Zmat
A matrix containing the Zscore (in rows) for each environment (in columns)
Threshold
Threshold on posteriors (to be H1) to filter markers for correlation computation (0.6 by default)
plotting
A boolean saying to plot or not (FALSE by default)
Cores
The number of cores to used, optional. By default, availableCores()-1 cores is used.
Value
A vector of index of markers which seems not significant (under H0)
metaGE documentation built on April 3, 2025, 8:48 p.m.
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| GetH0Items | R Documentation |
GetH0Items
Description
This function give the index of the markers which seems not significant (under H0)
Usage
GetH0Items(Zmat, Threshold = 0.8, plotting = FALSE, Cores = NULL)
Arguments
Zmat |
A matrix containing the Zscore (in rows) for each environment (in columns) |
Threshold |
Threshold on posteriors (to be H1) to filter markers for correlation computation (0.6 by default) |
plotting |
A boolean saying to plot or not (FALSE by default) |
Cores |
The number of cores to used, optional. By default, availableCores()-1 cores is used. |
Value
A vector of index of markers which seems not significant (under H0)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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