thresUnif: Computation of the significance threshold
In metaGE: Meta-Analysis for Detecting Genotype x Environment Associations
thresUnif R Documentation
Computation of the significance threshold
Description
The function thresUnif computes the significance threshold.(function from localscore)
Usage
thresUnif(L, cor, xi, alpha = 0.05)
Arguments
L
The length of the chromosome
cor
The autocorrelation of the chromosome
xi
The threshold of the score, xi = 1,2,3 or 4.
alpha
The nominal threshold.
Details
The distribution of the p-values is uniform, the local score follows a Gumbel distribution under the null.
Value
the significance threshold.
metaGE documentation built on April 3, 2025, 8:48 p.m.
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| thresUnif | R Documentation |
Computation of the significance threshold
Description
The function thresUnif computes the significance threshold.(function from localscore)
Usage
thresUnif(L, cor, xi, alpha = 0.05)
Arguments
L |
The length of the chromosome |
cor |
The autocorrelation of the chromosome |
xi |
The threshold of the score, xi = 1,2,3 or 4. |
alpha |
The nominal threshold. |
Details
The distribution of the p-values is uniform, the local score follows a Gumbel distribution under the null.
Value
the significance threshold.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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