metaData: Results of different GWAS.
In metaGE: Meta-Analysis for Detecting Genotype x Environment Associations
metaData R Documentation
Results of different GWAS.
Description
A dataset containing the results of 10 different genetic association studies testing the association between a set of 25,436 markers and the grain yield.
The data are extrated from: Drops Amaizing available on the https://doi.org/10.15454/6TL2N4 website.
This dataset were obtained thanks to the metaGE.collect function.
Usage
metaData
Format
A data frame with 25,436 rows and 35 variables:
CHR: chromosome of the marker
POS: position of the marker
MARKER: name of the marker
FREQ.env: maf of the marker in the environment env
EFFECT.env: regression coefficient of the marker in the environment env
EFFECT_SE.env: standard error of the regression coefficient of the marker in the environment env
PVAL.env: pvalue of the marker in the environment env
WEIGHT.env: weight of the marker in the environment env
ALLELE0: allele0
ALLELE1: allele1
metaGE documentation built on April 3, 2025, 8:48 p.m.
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| metaData | R Documentation |
Results of different GWAS.
Description
A dataset containing the results of 10 different genetic association studies testing the association between a set of 25,436 markers and the grain yield. The data are extrated from: Drops Amaizing available on the https://doi.org/10.15454/6TL2N4 website. This dataset were obtained thanks to the metaGE.collect function.
Usage
metaData
Format
A data frame with 25,436 rows and 35 variables:
CHR: chromosome of the marker
POS: position of the marker
MARKER: name of the marker
FREQ.env: maf of the marker in the environment env
EFFECT.env: regression coefficient of the marker in the environment env
EFFECT_SE.env: standard error of the regression coefficient of the marker in the environment env
PVAL.env: pvalue of the marker in the environment env
WEIGHT.env: weight of the marker in the environment env
ALLELE0: allele0
ALLELE1: allele1
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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