get system quantity (e.g. startValue, inflowRate, washOut) for all state variables (convention is that microbes are before resources)
1 2 3 4 5 6 7 8 9 10 | getValues(
sysInfoMicrobes,
sysInfoRes,
stateVarNames,
quantity,
strainNames,
microbeNames,
resourceNames,
numStrains
)
|
sysInfoMicrobes |
sys info dataframe for microbes |
sysInfoRes |
sys info dataframe for resources |
stateVarNames |
Vector of names of all the state variables |
quantity |
String. Name of quantity to get value for e.g. 'startValue' |
strainNames |
Vector of strings of strain names |
microbeNames |
Vector of strings which contains the names of the microbial groups in the system e.g. c('Bacteroides','Acetogens') |
resourceNames |
Vector of strings which contains the names of the resources in the system |
numStrains |
Integer. Number of strains per group |
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