fullTaxonomy: The full taxonomy of a genus

Description Usage Arguments Details Value Author(s) See Also Examples

View source: R/genusLookup.R

Description

Converts a genus to a string containing the full taxonomy.

Usage

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fullTaxonomy(genera)

Arguments

genera

A vector of texts, the genera names to look up.

Details

The argument genera must consist of names in the Genus column of the data set taxonomy.table.

"k__<...>;p__<...>;c__<...>;o__<...>;f__<...>;g__<...>;"

where <...> is some proper text.

Value

A character vector containing the taxonomy information.

Author(s)

Lars Snipen.

See Also

taxonomy.table, genusLookup.

Examples

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genera <-  c("Bacillus","Clostridium","Hyphomonas") 
fullTaxonomy(genera)

microcontax documentation built on Aug. 11, 2020, 5:08 p.m.