microeco: Microbial Community Ecology Data Analysis

A series of statistical and plotting approaches in microbial community ecology based on the R6 class. The classes are designed for data preprocessing, taxa abundance plotting, alpha diversity analysis, beta diversity analysis, differential abundance test, null model analysis, network analysis, machine learning, environmental data analysis and functional analysis.

Getting started

Package details

AuthorChi Liu [aut, cre], Felipe R. P. Mansoldo [ctb], Umer Zeeshan Ijaz [ctb], Chenhao Li [ctb], Yang Cao [ctb], Minjie Yao [ctb], Xiangzhen Li [ctb]
MaintainerChi Liu <liuchi0426@126.com>
LicenseGPL-3
Version1.2.2
URL https://github.com/ChiLiubio/microeco
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("microeco")

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microeco documentation built on Nov. 18, 2023, 9:06 a.m.