Nothing
library(microplot)
latexSetOptions()
## LaTeX example and MSWord example
data(toxicity) ## Count of Toxicities with simulated data
toxicity$Toxicity <- rownames(toxicity)
ToxColor <- c(rev(HH::likertColor(4)), "brown4")
## One panel
LL1 <- HH::likert(Toxicity ~ Grade1 + Grade2 + Grade3 + Grade4 + Grade5,
xlab="", ylab="",
data=toxicity, col=ToxColor, ReferenceZero=2.5,
scales=list(x=list(limits=c(-37,13), at=seq(-30,10,10),
labels=c(30,20,10,0,10))),
auto.key=list(title="Grade", text=format(1:5)),
main="Counts of Grade by Toxicity")
LL1
## Four panels, one for each level of Toxicity
LL4 <- HH::likert(
Toxicity ~ Grade1 + Grade2 + Grade3 + Grade4 + Grade5 | Toxicity,
layout=c(1,4), strip=FALSE, xlab="", ylab="",
data=toxicity[4:1,], col=ToxColor, ReferenceZero=2.5,
scales=list(x=list(limits=c(-37,13), at=seq(-30,10,10),
labels=c(30,20,10,0,10)),
y=list(relation="free")),
auto.key=FALSE, ## auto.key doesn't isolate well
key = list(text=list(format(1:5)), ## highly specified key
rectangles=list(col=ToxColor, border="white"),
columns=5, size=2.8, between=.5,
between.columns=1.5, title = "Grade",
space="bottom"),
main="Counts of Grade by Toxicity")
LL4
## 1. Display key, control of panel heights, specify column labels,
latex(LL4, y.axis=FALSE, height.panel=.25, width.panel=1.8,
height.x.axis=.4, rowlabel="Toxicity", vectorgraph.colname="Counts by Grade",
key=LL4$legend$bottom$args$key, height.key=.5, width.key=3,
key.includegraphics=list(scale=.7, hspace.left="2.6in"))
## 2. Display as LaTeX table of numbers along with one column of graphs
toxicityf <- format(data.matrix(toxicity[, 1:5]))
colnames(toxicityf) <- 1:5
latex(LL4, y.axis=FALSE, height.panel=.25, width.panel=1.8,
height.x.axis=.5, rowlabel="Toxicity", vectorgraph.colname="Counts by Grade",
key=LL4$legend$bottom$args$key, height.key=.5, width.key=3,
key.includegraphics=list(scale=.7, hspace.left="1.8in"),
dataobject=toxicityf,
cgroup=c("Grade",""),
n.cgroup=c(5,1))
## 3. Display as MS Word table with column of graphs.
Toxdf.docx <-
msWord(LL4, height.panel=.5, width.panel=3,
key=LL4$legend$bottom$args$key,
height.key=.5, width.key=3, key.align="right",
dataobject=toxicityf, width.dataobject=.4,
title="Toxicity2",
rowlabel="Toxicity", width.rowname=2,
data.header="Grade",
graph.header="",
vectorgraph.colname="Counts by Grade",
y.axis=FALSE,
caption="Simulated Counts of Grade by Toxicity")
print.default(Toxdf.docx) ## print.default displays the file name
Toxdf.docx ## print method opens file
## You may pick up this graph and paste it into a larger .docx file.
## 4. Display as HTML table with column of graphs.
Toxdf.flextable <-
msWord(LL4, height.panel=.5, width.panel=3,
key=LL4$legend$bottom$args$key,
height.key=.5, width.key=3, key.align="right",
dataobject=toxicityf, width.dataobject=.4,
title="Toxicity2",
rowlabel="Toxicity", width.rowname=2,
data.header="Grade",
graph.header="",
vectorgraph.colname="Counts by Grade",
y.axis=FALSE,
caption="Simulated Counts of Grade by Toxicity",
filetype="html")
Toxdf.flextable
## Printing the returned value will display the table in your browser.
## If you wish to keep the html object, you MUST save it manually!
## The original file is in a temporary directory and will vanish when R is closed.
## Switch to the browser window and save the displayed table as a 'Web Archive'
## in a directory of your choice. Choose an appropriate basename for the saved file,
## as the default basename of the file is the noninformative 'index'.
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