tests/testthat/_snaps/rate_functions.md

In mizer: Dynamic Multi-Species Size Spectrum Modelling

getFeedingLevel for MizerParams

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  "attributes": {
    "dim": {
      "type": "integer",
      "attributes": {},
      "value": [3, 100]
    },
    "dimnames": {
      "type": "list",
      "attributes": {
        "names": {
          "type": "character",
          "attributes": {},
          "value": ["sp", "w"]
        }
      },
      "value": [
        {
          "type": "character",
          "attributes": {},
          "value": ["Sprat", "Herring", "Cod"]
        },
        {
          "type": "character",
          "attributes": {},
          "value": ["0.001", "0.00119", "0.00142", "0.0017", "0.00203", "0.00242", "0.00289", "0.00345", "0.00411", "0.00491", "0.00586", "0.00699", "0.00834", "0.00995", "0.0119", "0.0142", "0.0169", "0.0202", "0.0241", "0.0288", "0.0343", "0.0409", "0.0489", "0.0583", "0.0696", "0.083", "0.0991", "0.118", "0.141", "0.168", "0.201", "0.24", "0.286", "0.342", "0.408", "0.486", "0.58", "0.693", "0.827", "0.987", "1.18", "1.4", "1.68", "2", "2.39", "2.85", "3.4", "4.06", "4.84", "5.78", "6.9", "8.23", "9.82", "11.7", "14", "16.7", "19.9", "23.8", "28.4", "33.8", "40.4", "48.2", "57.5", "68.7", "81.9", "97.8", "117", "139", "166", "198", "237", "282", "337", "402", "480", "573", "683", "816", "973", "1160", "1390", "1650", "1970", "2360", "2810", "3350", "4000", "4780", "5700", "6800", "8120", "9690", "11600", "13800", "16500", "19600", "23400", "28000", "33400", "39900"]
        }
      ]
    },
    "class": {
      "type": "character",
      "attributes": {},
      "value": ["ArraySpeciesBySize", "matrix", "array"]
    },
    "value_name": {
      "type": "character",
      "attributes": {},
      "value": ["Feeding level"]
    },
    "type": {
      "type": "character",
      "attributes": {},
      "value": ["proportion"]
    },
    "representation": {
      "type": "character",
      "attributes": {},
      "value": ["point"]
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  },
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}

getPredRate for MizerParams

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  "type": "double",
  "attributes": {
    "dim": {
      "type": "integer",
      "attributes": {},
      "value": [3, 218]
    },
    "dimnames": {
      "type": "list",
      "attributes": {
        "names": {
          "type": "character",
          "attributes": {},
          "value": ["sp", "w_prey"]
        }
      },
      "value": [
        {
          "type": "character",
          "attributes": {},
          "value": ["Sprat", "Herring", "Cod"]
        },
        {
          "type": "character",
          "attributes": {},
          "value": ["8.73e-13", "1.04e-12", "1.24e-12", "1.48e-12", "1.77e-12", "2.11e-12", "2.52e-12", "3.01e-12", "3.59e-12", "4.28e-12", "5.11e-12", "6.1e-12", "7.28e-12", "8.69e-12", "1.04e-11", "1.24e-11", "1.48e-11", "1.76e-11", "2.1e-11", "2.51e-11", "2.99e-11", "3.57e-11", "4.26e-11", "5.09e-11", "6.07e-11", "7.25e-11", "8.65e-11", "1.03e-10", "1.23e-10", "1.47e-10", "1.75e-10", "2.09e-10", "2.5e-10", "2.98e-10", "3.56e-10", "4.25e-10", "5.07e-10", "6.05e-10", "7.21e-10", "8.61e-10", "1.03e-09", "1.23e-09", "1.46e-09", "1.75e-09", "2.08e-09", "2.49e-09", "2.97e-09", "3.54e-09", "4.23e-09", "5.04e-09", "6.02e-09", "7.18e-09", "8.57e-09", "1.02e-08", "1.22e-08", "1.46e-08", "1.74e-08", "2.07e-08", "2.48e-08", "2.95e-08", "3.53e-08", "4.21e-08", "5.02e-08", "5.99e-08", "7.15e-08", "8.53e-08", "1.02e-07", "1.22e-07", "1.45e-07", "1.73e-07", "2.07e-07", "2.46e-07", "2.94e-07", "3.51e-07", "4.19e-07", "5e-07", "5.96e-07", "7.12e-07", "8.49e-07", "1.01e-06", "1.21e-06", "1.44e-06", "1.72e-06", "2.06e-06", "2.45e-06", "2.93e-06", "3.49e-06", "4.17e-06", "4.98e-06", "5.94e-06", "7.09e-06", "8.46e-06", "1.01e-05", "1.2e-05", "1.44e-05", "1.71e-05", "2.05e-05", "2.44e-05", "2.91e-05", "3.48e-05", "4.15e-05", "4.95e-05", "5.91e-05", "7.05e-05", "8.42e-05", "1e-04", "0.00012", "0.000143", "0.000171", "0.000204", "0.000243", "0.00029", "0.000346", "0.000413", "0.000493", "0.000588", "0.000702", "0.000838", "0.001", "0.00119", "0.00142", "0.0017", "0.00203", "0.00242", "0.00289", "0.00345", "0.00411", "0.00491", "0.00586", "0.00699", "0.00834", "0.00995", "0.0119", "0.0142", "0.0169", "0.0202", "0.0241", "0.0288", "0.0343", "0.0409", "0.0489", "0.0583", "0.0696", "0.083", "0.0991", "0.118", "0.141", "0.168", "0.201", "0.24", "0.286", "0.342", "0.408", "0.486", "0.58", "0.693", "0.827", "0.987", "1.18", "1.4", "1.68", "2", "2.39", "2.85", "3.4", "4.06", "4.84", "5.78", "6.9", "8.23", "9.82", "11.7", "14", "16.7", "19.9", "23.8", "28.4", "33.8", "40.4", "48.2", "57.5", "68.7", "81.9", "97.8", "117", "139", "166", "198", "237", "282", "337", "402", "480", "573", "683", "816", "973", "1160", "1390", "1650", "1970", "2360", "2810", "3350", "4000", "4780", "5700", "6800", "8120", "9690", "11600", "13800", "16500", "19600", "23400", "28000", "33400", "39900"]
        }
      ]
    },
    "class": {
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      "attributes": {},
      "value": ["ArraySpeciesBySize", "matrix", "array"]
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    "value_name": {
      "type": "character",
      "attributes": {},
      "value": ["Predation rate"]
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    "units": {
      "type": "character",
      "attributes": {},
      "value": ["1/year"]
    },
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      "attributes": {},
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197.68679332, 1657184.58052985, 4443.94453256, 226.91156566, 1734235.54691925, 4215.52632373, 258.69927939, 1747698.03680531, 3987.97484125, 292.98364531, 1694630.06174663, 3762.44761683, 329.62490861, 1579802.54040474, 3540.021994, 368.39441138, 1414987.26804181, 3321.68832026, 408.96099389, 1216898.75295298, 3108.34468091, 450.88150949, 1004298.42177957, 2900.79316354, 493.59495038, 794973.12918851, 2699.73761804, 536.42645118, 603276.6521061, 2505.78285297, 578.59845997, 438696.45434601, 2319.43517548, 619.25113233, 305575.64729172, 2141.10419099, 657.47106714, 203805.86150866, 1971.10571691, 692.33047351, 130108.52208616, 1809.66571206, 722.93067275, 79477.4937625, 1656.92505713, 748.44549138, 46440.77834305, 1512.945045, 768.17062695, 25950.62040493, 1377.71348382, 781.5619254, 13863.49191619, 1251.15115735, 788.27656983, 7078.88511422, 1133.11870644, 788.1732901, 3453.99391366, 1023.42351408, 781.34850203, 1610.07387294, 921.82673613, 768.10324261, 716.87944996, 828.05008738, 748.94914653, 304.81495148, 741.78311024, 724.56478996, 123.74702514, 662.68885363, 695.7116279, 47.95841126, 590.41092018, 663.36929537, 17.74000945, 524.57831467, 628.29563591, 0, 464.81160344, 591.44614496, 0, 410.72740327, 553.70939575, 0, 361.94252168, 515.76840044, 0, 318.07805157, 478.11871241, 0, 278.7642647, 441.27687267, 0, 243.63800016, 405.37066657, 0, 212.35173217, 371.20092364, 0, 184.57575619, 338.19830335, 0, 159.98660387, 307.05836193, 0, 138.28629587, 277.65440488, 0, 119.2111415, 249.81767463, 0, 102.48417889, 223.40944888, 0, 87.83198148, 198.65219107, 0, 0, 175.64614811, 0, 0, 154.30801511, 0, 0, 134.20480339, 0, 0, 115.90590215, 0, 0, 99.06947277, 0, 0, 83.86417027, 0, 0, 70.21045431, 0, 0, 58.47211449, 0, 0, 47.78640658, 0, 0, 38.68015927, 0, 0, 31.08724468, 0, 0, 24.57176017, 0, 0, 19.05428931, 0, 0, 14.62743547, 0, 0, 11.09310835, 0, 0, 8.12557309, 0, 0, 5.78101079, 0, 0, 4.19072833, 0, 0, 2.98005447, 0, 0, 2.05841601, 0, 0, 1.41472616, 0, 0, 0.87556236, 0, 0, 0.56659694, 0, 0, 0.27623448, 0, 0, 0.13726909, 0, 0, 0.07535991, 0, 0, 0.00128593, 0, 0, 6.14151393e-14]
}

getPredMort for MizerParams

{
  "type": "double",
  "attributes": {
    "dim": {
      "type": "integer",
      "attributes": {},
      "value": [3, 100]
    },
    "dimnames": {
      "type": "list",
      "attributes": {
        "names": {
          "type": "character",
          "attributes": {},
          "value": ["sp", "w"]
        }
      },
      "value": [
        {
          "type": "character",
          "attributes": {},
          "value": ["Sprat", "Herring", "Cod"]
        },
        {
          "type": "character",
          "attributes": {},
          "value": ["0.001", "0.00119", "0.00142", "0.0017", "0.00203", "0.00242", "0.00289", "0.00345", "0.00411", "0.00491", "0.00586", "0.00699", "0.00834", "0.00995", "0.0119", "0.0142", "0.0169", "0.0202", "0.0241", "0.0288", "0.0343", "0.0409", "0.0489", "0.0583", "0.0696", "0.083", "0.0991", "0.118", "0.141", "0.168", "0.201", "0.24", "0.286", "0.342", "0.408", "0.486", "0.58", "0.693", "0.827", "0.987", "1.18", "1.4", "1.68", "2", "2.39", "2.85", "3.4", "4.06", "4.84", "5.78", "6.9", "8.23", "9.82", "11.7", "14", "16.7", "19.9", "23.8", "28.4", "33.8", "40.4", "48.2", "57.5", "68.7", "81.9", "97.8", "117", "139", "166", "198", "237", "282", "337", "402", "480", "573", "683", "816", "973", "1160", "1390", "1650", "1970", "2360", "2810", "3350", "4000", "4780", "5700", "6800", "8120", "9690", "11600", "13800", "16500", "19600", "23400", "28000", "33400", "39900"]
        }
      ]
    },
    "class": {
      "type": "character",
      "attributes": {},
      "value": ["ArraySpeciesBySize", "matrix", "array"]
    },
    "value_name": {
      "type": "character",
      "attributes": {},
      "value": ["Predation mortality"]
    },
    "units": {
      "type": "character",
      "attributes": {},
      "value": ["1/year"]
    },
    "type": {
      "type": "character",
      "attributes": {},
      "value": ["value"]
    },
    "representation": {
      "type": "character",
      "attributes": {},
      "value": ["average"]
    }
  },
  "value": [1620.54514448, 3661.04629032, 2275.82527489, 1719.21961641, 3814.15780294, 2379.51209696, 1829.29259114, 3966.98027609, 2486.1931826, 1954.47042106, 4120.12833196, 2597.19648495, 2099.41827813, 4274.59597231, 2714.30377717, 2269.88402805, 4431.81229397, 2839.81273406, 2472.97119376, 4593.75318514, 2976.66805246, 2717.76271737, 4763.18470552, 3128.75494023, 3016.55960122, 4944.13730734, 3301.47718144, 3387.03271994, 5142.72292206, 3502.75782539, 3855.60732856, 5368.41492685, 3744.61037537, 4462.45947529, 5635.93345396, 4045.45598228, 5268.68001827, 5967.94487815, 4433.44385342, 6366.52902481, 6398.92235621, 4951.20203081, 7894.2835747, 6980.73248674, 5662.71432733, 10057.89896382, 7790.78276934, 6663.3511507, 13162.34182064, 8943.80465335, 8094.37756417, 17655.62334944, 10608.41079716, 10163.34050572, 24187.65464356, 13029.22440558, 13171.31751002, 33683.21782699, 16554.31507917, 17546.69988534, 47422.61081102, 21665.51878975, 23882.5276523, 67114.14430287, 29005.69285575, 32970.05115546, 94929.9731724, 39392.18264225, 45815.31596154, 133463.22807928, 53800.69433859, 63619.3098504, 185555.60981256, 73300.45788892, 87698.13483213, 253948.77500362, 98923.13075919, 119321.59605289, 340738.59801697, 131457.57812784, 159460.52424619, 446663.19814219, 171182.14471759, 208457.13322897, 570328.37048315, 217573.38885887, 265666.39597558, 707549.55089012, 269058.63610953, 329151.37478533, 851037.95108271, 322897.94898103, 395537.89854769, 990647.41545724, 375276.94122691, 460128.84803171, 1114306.87833193, 421657.39401238, 517335.86651884, 1209596.65256261, 457369.96776551, 561409.1568167, 1265724.86703646, 478357.37940268, 587352.54203482, 1275489.94738354, 481912.33153107, 591832.06338668, 1236747.07412674, 467228.9258368, 573854.92393592, 1152975.08152589, 435615.82153971, 535031.94518009, 1032757.28889475, 390301.00812818, 479337.18655989, 888280.82881356, 335867.51171399, 412413.14163994, 733225.23567781, 277459.4506837, 340593.17049236, 580559.38963572, 219953.63438451, 269881.50816155, 440748.95181286, 167285.51903186, 205123.33150142, 320711.3575943, 122056.26643563, 149520.94427661, 223613.10023525, 85456.52682781, 104539.94006539, 149374.93780154, 57456.42112185, 70143.13363235, 95606.1241888, 37156.84814097, 45223.12927311, 58656.29975793, 23185.03508756, 28089.36457965, 34535.44992601, 14040.48049773, 16894.0749195, 19562.92181558, 8339.01387773, 9932.80762432, 10717.41072855, 4944.41392995, 5806.49006271, 5738.16004316, 3006.46599055, 3468.28624791, 3062.76702522, 1937.58941131, 2194.82622575, 1685.98499243, 1359.73855506, 1520.81397027, 1002.5541025, 1045.30888728, 1166.26522618, 670.22238186, 865.62155379, 973.06208835, 506.77497105, 752.18374209, 857.22714566, 420.78073739, 670.68927904, 776.94707081, 368.8581496, 604.83004153, 712.51119238, 327.09752245, 545.67000685, 653.34633925, 299.53010676, 494.75881605, 601.77244557, 273.34665494, 447.2566772, 552.18295719, 248.61057089, 403.11451774, 504.8142764, 225.39486001, 362.29780848, 459.9230287, 203.64309231, 324.61898718, 417.46272323, 183.53033047, 290.17322795, 377.92257889, 164.77398167, 258.51283087, 340.72132496, 147.52016629, 229.70620907, 306.27511586, 131.64441792, 203.50574034, 274.36368455, 117.0174714, 179.66936905, 244.74755871, 103.5165623, 157.9584528, 217.2055183, 91.14182445, 138.28287915, 191.80186385, 59.29457291, 71.09792507, 138.15396045, 52.09125251, 62.46069051, 121.37051478, 45.30481645, 54.32332652, 105.55839282, 39.12747897, 46.91631006, 91.16544594, 33.44384229, 40.10127195, 77.92280201, 28.31084093, 33.94648023, 65.96311611, 23.70162367, 28.41973862, 55.22382604, 19.73899851, 23.66830164, 45.99106943, 16.13172051, 19.34294826, 37.58625734, 13.05763633, 15.65692784, 30.42376535, 10.49442254, 12.58347317, 24.45158074, 8.29492728, 9.94613991, 19.32684559, 6.43234115, 7.71278191, 14.98709514, 4.93792519, 5.92088311, 11.50516628, 3.74480812, 4.49026065, 8.7252517, 2.74302848, 3.2890638, 6.39114558, 1.95155185, 2.34003351, 4.54703701, 1.41470479, 1.69632008, 3.29620503, 1.00600587, 1.20626436, 2.34395306, 0.69487945, 0.83320419, 1.61904105, 0.47758283, 0.57265187, 1.1127487, 0.29557207, 0.35440952, 0.68867099, 0.19127162, 0.22934671, 0.44565515, 0.09325115, 0.111814, 0.21727142, 0.04633926, 0.05556369, 0.1079686, 0.02543998, 0.03050413, 0.05927412, 0.0004341, 0.00052052, 0.00101145, 2.07325039e-14, 2.48595772e-14, 4.8305897e-14]
}

getResourceMort

{
  "type": "double",
  "attributes": {
    "names": {
      "type": "character",
      "attributes": {},
      "value": ["8.73e-13", "1.04e-12", "1.24e-12", "1.48e-12", "1.77e-12", "2.11e-12", "2.52e-12", "3.01e-12", "3.59e-12", "4.28e-12", "5.11e-12", "6.1e-12", "7.28e-12", "8.69e-12", "1.04e-11", "1.24e-11", "1.48e-11", "1.76e-11", "2.1e-11", "2.51e-11", "2.99e-11", "3.57e-11", "4.26e-11", "5.09e-11", "6.07e-11", "7.25e-11", "8.65e-11", "1.03e-10", "1.23e-10", "1.47e-10", "1.75e-10", "2.09e-10", "2.5e-10", "2.98e-10", "3.56e-10", "4.25e-10", "5.07e-10", "6.05e-10", "7.21e-10", "8.61e-10", "1.03e-09", "1.23e-09", "1.46e-09", "1.75e-09", "2.08e-09", "2.49e-09", "2.97e-09", "3.54e-09", "4.23e-09", "5.04e-09", "6.02e-09", "7.18e-09", "8.57e-09", "1.02e-08", "1.22e-08", "1.46e-08", "1.74e-08", "2.07e-08", "2.48e-08", "2.95e-08", "3.53e-08", "4.21e-08", "5.02e-08", "5.99e-08", "7.15e-08", "8.53e-08", "1.02e-07", "1.22e-07", "1.45e-07", "1.73e-07", "2.07e-07", "2.46e-07", "2.94e-07", "3.51e-07", "4.19e-07", "5e-07", "5.96e-07", "7.12e-07", "8.49e-07", "1.01e-06", "1.21e-06", "1.44e-06", "1.72e-06", "2.06e-06", "2.45e-06", "2.93e-06", "3.49e-06", "4.17e-06", "4.98e-06", "5.94e-06", "7.09e-06", "8.46e-06", "1.01e-05", "1.2e-05", "1.44e-05", "1.71e-05", "2.05e-05", "2.44e-05", "2.91e-05", "3.48e-05", "4.15e-05", "4.95e-05", "5.91e-05", "7.05e-05", "8.42e-05", "1e-04", "0.00012", "0.000143", "0.000171", "0.000204", "0.000243", "0.00029", "0.000346", "0.000413", "0.000493", "0.000588", "0.000702", "0.000838", "0.001", "0.00119", "0.00142", "0.0017", "0.00203", "0.00242", "0.00289", "0.00345", "0.00411", "0.00491", "0.00586", "0.00699", "0.00834", "0.00995", "0.0119", "0.0142", "0.0169", "0.0202", "0.0241", "0.0288", "0.0343", "0.0409", "0.0489", "0.0583", "0.0696", "0.083", "0.0991", "0.118", "0.141", "0.168", "0.201", "0.24", "0.286", "0.342", "0.408", "0.486", "0.58", "0.693", "0.827", "0.987", "1.18", "1.4", "1.68", "2", "2.39", "2.85", "3.4", "4.06", "4.84", "5.78", "6.9", "8.23", "9.82", "11.7", "14", "16.7", "19.9", "23.8", "28.4", "33.8", "40.4", "48.2", "57.5", "68.7", "81.9", "97.8", "117", "139", "166", "198", "237", "282", "337", "402", "480", "573", "683", "816", "973", "1160", "1390", "1650", "1970", "2360", "2810", "3350", "4000", "4780", "5700", "6800", "8120", "9690", "11600", "13800", "16500", "19600", "23400", "28000", "33400", "39900"]
    }
  },
  "value": [7.69348388e-07, 1.06523105e-06, 1.4722853e-06, 2.03092328e-06, 2.79630295e-06, 3.84282836e-06, 5.27111289e-06, 7.21646968e-06, 9.86110372e-06, 0.00001345, 0.00001831, 0.00002487, 0.00003373, 0.00004565, 0.00006167, 0.00008314, 0.00011186, 0.00015022, 0.00020132, 0.00026926, 0.00035942, 0.00047878, 0.00063648, 0.00084439, 0.00111789, 0.00147688, 0.00194706, 0.00256149, 0.00336262, 0.00440481, 0.00575752, 0.00750922, 0.00977233, 0.01268935, 0.01644035, 0.02125231, 0.02741059, 0.03527286, 0.04528627, 0.05800822, 0.07413156, 0.09451507, 0.1202201, 0.15255454, 0.19312534, 0.24390104, 0.30728587, 0.38620732, 0.48421917, 0.60562211, 0.75560456, 0.94040626, 1.16750746, 1.44584684, 1.78607126, 2.20082076, 2.70505205, 3.31640408, 4.05560871, 4.94694978, 6.0187734, 7.30405158, 8.84100121, 10.67375926, 12.85311414, 15.43729202, 18.49279568, 22.09529133, 26.33053741, 31.29534706, 37.09857348, 43.86210504, 51.72185396, 60.82871987, 71.34950602, 83.46776345, 97.38453511, 113.3189691, 131.5087679, 152.21043778, 175.69930114, 202.26923318, 232.23208378, 265.91674599, 303.66783363, 345.84393348, 392.81540111, 444.96167507, 502.66809141, 566.32218941, 636.3095104, 713.00890428, 796.78737221, 887.99448834, 986.95645585, 1093.96986042, 1209.29518495, 1333.15014269, 1465.70287639, 1607.06507233, 1757.28506899, 1916.34112804, 2084.13519965, 2260.48776288, 2445.13463177, 2637.72692118, 2837.83554489, 3044.96151397, 3258.5527684, 3478.02728323, 3702.80097529, 3932.31810017, 4166.08227672, 4403.68884427, 4644.86404809, 4889.52220968, 5137.85554908, 5390.46886597, 5648.56043852, 5914.13316272, 6190.20443606, 6480.98354845, 6792.01618028, 7130.36462644, 7504.99242985, 7927.62991208, 8414.4826322, 8989.19172875, 9687.48422479, 10564.03323587, 11702.29008063, 13228.55374492, 15332.33895621, 18296.08745949, 22538.14282, 28673.14184124, 37592.73276817, 50565.65163398, 69348.32129041, 96284.27423063, 134353.28710921, 187112.57746719, 258460.3392899, 352157.60799646, 471079.76995128, 616240.0811209, 785727.33491619, 973803.35635061, 1170472.52511277, 1361820.32756092, 1531292.2085421, 1661855.43662806, 1738709.77252238, 1751978.99529187, 1698722.13427206, 1583710.95681012, 1418717.91735596, 1220457.97914338, 1007692.80989348, 798209.29325773, 606361.03341904, 441635.14065381, 308374.22254986, 206469.29769908, 132641.11847097, 81882.86431101, 48721.894015, 28109.89581415, 15902.91964337, 9000.17711076, 5258.76592977, 3300.00385168, 2293.87868387, 1771.16285167, 1482.14750667, 1301.73862681, 1170.61396003, 1056.2577484, 964.43679902, 877.71092212, 796.19676398, 720.04113737, 649.00866672, 583.55265581, 522.77405954, 467.04496579, 415.94070075, 369.02881613, 325.89362778, 286.48417255, 175.64614811, 154.30801511, 134.20480339, 115.90590215, 99.06947277, 83.86417027, 70.21045431, 58.47211449, 47.78640658, 38.68015927, 31.08724468, 24.57176017, 19.05428931, 14.62743547, 11.09310835, 8.12557309, 5.78101079, 4.19072833, 2.98005447, 2.05841601, 1.41472616, 0.87556236, 0.56659694, 0.27623448, 0.13726909, 0.07535991, 0.00128593, 6.14151393e-14]
}

getFmortGear

{
  "type": "double",
  "attributes": {
    "dim": {
      "type": "integer",
      "attributes": {},
      "value": [7, 3, 3, 100]
    },
    "dimnames": {
      "type": "list",
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getFMort

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    "value_name": {
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    "units": {
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getMort

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          "value": ["0.001", "0.00119", "0.00142", "0.0017", "0.00203", "0.00242", "0.00289", "0.00345", "0.00411", "0.00491", "0.00586", "0.00699", "0.00834", "0.00995", "0.0119", "0.0142", "0.0169", "0.0202", "0.0241", "0.0288", "0.0343", "0.0409", "0.0489", "0.0583", "0.0696", "0.083", "0.0991", "0.118", "0.141", "0.168", "0.201", "0.24", "0.286", "0.342", "0.408", "0.486", "0.58", "0.693", "0.827", "0.987", "1.18", "1.4", "1.68", "2", "2.39", "2.85", "3.4", "4.06", "4.84", "5.78", "6.9", "8.23", "9.82", "11.7", "14", "16.7", "19.9", "23.8", "28.4", "33.8", "40.4", "48.2", "57.5", "68.7", "81.9", "97.8", "117", "139", "166", "198", "237", "282", "337", "402", "480", "573", "683", "816", "973", "1160", "1390", "1650", "1970", "2360", "2810", "3350", "4000", "4780", "5700", "6800", "8120", "9690", "11600", "13800", "16500", "19600", "23400", "28000", "33400", "39900"]
        }
      ]
    },
    "class": {
      "type": "character",
      "attributes": {},
      "value": ["ArraySpeciesBySize", "matrix", "array"]
    },
    "value_name": {
      "type": "character",
      "attributes": {},
      "value": ["Total mortality"]
    },
    "units": {
      "type": "character",
      "attributes": {},
      "value": ["1/year"]
    },
    "type": {
      "type": "character",
      "attributes": {},
      "value": ["value"]
    },
    "representation": {
      "type": "character",
      "attributes": {},
      "value": ["average"]
    }
  },
  "value": [1620.73220406, 3661.13276768, 2275.8428408, 1719.40667599, 3814.2442803, 2379.52966286, 1829.47965071, 3967.06675345, 2486.2107485, 1954.65748064, 4120.21480932, 2597.21405085, 2099.6053377, 4274.68244967, 2714.32134307, 2270.07108763, 4431.89877133, 2839.83029996, 2473.15825333, 4593.8396625, 2976.68561836, 2717.94977694, 4763.27118288, 3128.77250613, 3016.74666079, 4944.2237847, 3301.49474734, 3387.21977951, 5142.80939942, 3502.77539129, 3855.79438813, 5368.50140421, 3744.62794127, 4462.64653486, 5636.01993132, 4045.47354818, 5268.86707784, 5968.03135551, 4433.46141933, 6366.71608439, 6399.00883357, 4951.21959671, 7894.47063427, 6980.8189641, 5662.73189323, 10058.08602339, 7790.8692467, 6663.3687166, 13162.52888021, 8943.89113071, 8094.39513007, 17655.81040901, 10608.49727453, 10163.35807162, 24187.84170314, 13029.31088294, 13171.33507592, 33683.40488657, 16554.40155653, 17546.71745124, 47422.7978706, 21665.60526711, 23882.5452182, 67114.33136244, 29005.77933311, 32970.06872136, 94930.16023198, 39392.26911961, 45815.33352744, 133463.41513885, 53800.78081595, 63619.3274163, 185555.79687214, 73300.54436628, 87698.15239804, 253948.9620632, 98923.21723655, 119321.6136188, 340738.78507655, 131457.6646052, 159460.54181209, 446663.38520176, 171182.23119495, 208457.15079487, 570328.55754272, 217573.47533623, 265666.41354148, 707549.7379497, 269058.72258689, 329151.39235123, 851038.13814228, 322898.03545839, 395537.9161136, 990647.60251681, 375277.02770427, 460128.86559761, 1114307.06539151, 421657.48048974, 517335.88408474, 1209596.83962218, 457370.05424287, 561409.17438261, 1265725.05409603, 478357.46588004, 587352.55960072, 1275490.13444311, 481912.41800843, 591832.08095258, 1236747.26118632, 467229.01231416, 573854.94150182, 1152975.26858546, 435615.90801707, 535031.96274599, 1032757.47595433, 390301.09460554, 479337.20412579, 888281.01587313, 335867.59819135, 412413.15920584, 733225.42273738, 277459.53716106, 340593.18805826, 580559.57669529, 219953.72086187, 269881.52572745, 440749.13887244, 167285.60550922, 205123.34906732, 320711.54465387, 122056.35291299, 149520.96184251, 223613.28729482, 85456.61330517, 104539.95763129, 149375.12486111, 57456.50759921, 70143.15119825, 95606.31124837, 37156.93461833, 45223.14683901, 58656.4868175, 23185.12156492, 28089.38214555, 34535.63698559, 14040.56697509, 16894.0924854, 19563.10887516, 8339.10035509, 9932.82519022, 10717.59778813, 4944.50040731, 5806.50762861, 5738.34710273, 3006.55246791, 3468.30381381, 3062.9540848, 1937.67588867, 2194.84379165, 1686.17205201, 1359.82503242, 1520.83153617, 1003.24116207, 1045.39536464, 1166.28279208, 670.90944144, 865.70803115, 973.07965425, 507.46203062, 752.27021945, 857.24471156, 421.46779696, 670.7757564, 776.96463671, 369.54520917, 604.91651889, 712.52875828, 327.78458203, 545.75648421, 653.36390516, 300.21716633, 494.84529341, 601.79001147, 274.03371452, 447.34315456, 552.20052309, 249.29763046, 403.2009951, 504.8318423, 226.08191959, 362.38428584, 459.9405946, 204.33015188, 324.70546454, 417.48028913, 184.21739004, 290.25970531, 377.94014479, 165.46104124, 259.09930823, 340.73889086, 148.20722587, 230.29268643, 306.29268176, 132.3314775, 204.0922177, 274.38125045, 117.70453097, 180.25584641, 244.76512461, 104.20362187, 158.54493016, 217.2230842, 91.82888402, 138.86935651, 191.81942975, 59.98163249, 71.68440243, 138.17152635, 52.77831208, 63.04716787, 121.38808069, 45.99187602, 54.90980388, 105.57595872, 39.81453854, 47.50278742, 91.18301184, 34.13090186, 40.68774931, 77.94036791, 28.9979005, 34.53295759, 65.98068201, 24.38868325, 29.00621598, 55.24139194, 20.42605808, 24.254779, 46.00863533, 16.81878008, 19.92942562, 37.60382324, 13.7446959, 16.2434052, 30.94133125, 11.18148211, 13.16995053, 24.96914664, 8.98198685, 10.53261727, 19.84441149, 7.11940073, 8.29925927, 15.50466104, 5.62498476, 6.50736047, 12.02273218, 4.43186769, 5.07673801, 9.2428176, 3.43008805, 3.87554116, 6.90871148, 2.63861143, 2.92651087, 5.06460291, 2.10176436, 2.28279745, 3.81377093, 1.69306545, 1.79274172, 2.86151896, 1.38193902, 1.41968156, 2.13660695, 1.1646424, 1.15912923, 1.6303146, 0.98263164, 0.94088688, 1.20623689, 0.87833119, 0.81582407, 0.96322105, 0.78031072, 0.69829136, 0.73483732, 0.73339883, 0.64204105, 0.6255345, 0.71249955, 0.61698149, 0.57684002, 0.68749368, 0.58699788, 0.51857735, 0.68705957, 0.58647736, 0.5175659]
}

getEReproAndGrowth

{
  "type": "double",
  "attributes": {
    "dim": {
      "type": "integer",
      "attributes": {},
      "value": [3, 100]
    },
    "dimnames": {
      "type": "list",
      "attributes": {
        "names": {
          "type": "character",
          "attributes": {},
          "value": ["sp", "w"]
        }
      },
      "value": [
        {
          "type": "character",
          "attributes": {},
          "value": ["Sprat", "Herring", "Cod"]
        },
        {
          "type": "character",
          "attributes": {},
          "value": ["0.001", "0.00119", "0.00142", "0.0017", "0.00203", "0.00242", "0.00289", "0.00345", "0.00411", "0.00491", "0.00586", "0.00699", "0.00834", "0.00995", "0.0119", "0.0142", "0.0169", "0.0202", "0.0241", "0.0288", "0.0343", "0.0409", "0.0489", "0.0583", "0.0696", "0.083", "0.0991", "0.118", "0.141", "0.168", "0.201", "0.24", "0.286", "0.342", "0.408", "0.486", "0.58", "0.693", "0.827", "0.987", "1.18", "1.4", "1.68", "2", "2.39", "2.85", "3.4", "4.06", "4.84", "5.78", "6.9", "8.23", "9.82", "11.7", "14", "16.7", "19.9", "23.8", "28.4", "33.8", "40.4", "48.2", "57.5", "68.7", "81.9", "97.8", "117", "139", "166", "198", "237", "282", "337", "402", "480", "573", "683", "816", "973", "1160", "1390", "1650", "1970", "2360", "2810", "3350", "4000", "4780", "5700", "6800", "8120", "9690", "11600", "13800", "16500", "19600", "23400", "28000", "33400", "39900"]
        }
      ]
    },
    "class": {
      "type": "character",
      "attributes": {},
      "value": ["ArraySpeciesBySize", "matrix", "array"]
    },
    "value_name": {
      "type": "character",
      "attributes": {},
      "value": ["Energy for growth and reproduction"]
    },
    "units": {
      "type": "character",
      "attributes": {},
      "value": ["g/year"]
    },
    "type": {
      "type": "character",
      "attributes": {},
      "value": ["value"]
    },
    "representation": {
      "type": "character",
      "attributes": {},
      "value": ["point"]
    }
  },
  "value": [0, 0.16164535, 0, 0, 0.18168717, 0, 0, 0.20421141, 0, 0, 0.22952496, 0, 0, 0.25797253, 0, 0, 0.28994117, 0, 0, 0.32586548, 0, 0, 0.36623329, 0, 0, 0.4115921, 0, 0, 0.46255614, 0, 0, 0.51981429, 0, 0, 0.5841388, 0, 0, 0.65639488, 0, 0, 0.73755117, 0, 0, 0.82869126, 0, 0, 0.9310259, 0, 0, 1.04590611, 0, 0, 1.1748368, 0, 0, 1.3194906, 0, 0, 1.48172124, 0, 0, 1.66357574, 0, 0, 1.86730387, 0, 0, 2.09536292, 0, 0, 2.35041479, 0, 0, 2.63531125, 0, 0, 2.95306102, 0, 0, 3.30677036, 0, 0, 3.69954503, 0, 0, 4.13433766, 0, 0, 4.61371872, 0, 0, 5.13954367, 0, 0, 5.71248201, 0, 0, 6.33136994, 0, 0, 6.99234869, 0, 0, 7.68776246, 0, 0, 8.40482279, 0, 0, 9.12411145, 0, 0, 9.81810395, 0, 0, 10.45005188, 0, 0, 10.97373906, 0, 0, 11.33475114, 0, 0, 11.47384257, 0, 0, 11.33260292, 0, 0, 10.86085827, 0, 0, 10.02429171, 0, 0, 8.8100849, 0, 0, 7.22855074, 0, 0, 5.30988758, 0, 0, 3.09688477, 0, 0, 0.63584019, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 3.15165786, 0, 0, 37.79835226, 0, 0, 89.65590267, 0, 0, 169.63387526, 0, 0, 259.09529128, 0, 0, 379.28172474, 0, 0, 517.42639926, 0, 0, 677.4980242, 0, 0, 847.3760778, 0, 0, 1025.04218852, 0, 0, 1222.0970465, 0, 0, 1431.81851959, 0, 0, 1653.02453602, 0, 0, 1893.11244383, 0, 0, 2156.26596851, 0, 0, 2443.78150896, 0, 23.10928534, 2761.91942849, 0, 169.73887122, 3117.03758308, 0, 310.55941645, 3511.58704635, 0, 525.29220709, 3953.12168296, 0, 794.36251051, 4446.95938048, 0, 1155.86271992, 5000.92884374, 0, 1583.92811532, 5621.98361261, 0, 1978.75743921, 6318.46694318, 0, 2401.39915089, 7100.19480407, 0, 2895.3766748, 7978.06340058, 0, 3370.04761683, 8963.54439725, 0, 3856.77828662, 10070.06685159, 0, 4414.92142164, 11312.84307469, 0, 5032.30150687, 12708.59221342, 0, 5714.68582631, 14276.17707836, 0, 6453.0923513, 16036.70520621, 0, 7268.78028023, 18013.98929706, 0, 8182.34442095, 20234.73933525, 0, 9206.48646854, 22728.93586051, 0, 10350.6444723, 25530.19701529, 0, 11633.42895089, 28676.31581404, 0, 13070.62391409, 32209.69578942, 0, 14684.7597491, 36177.97194789, 0, 16494.02287271, 40634.60792102]
}

getERepro

{
  "type": "double",
  "attributes": {
    "dim": {
      "type": "integer",
      "attributes": {},
      "value": [3, 100]
    },
    "dimnames": {
      "type": "list",
      "attributes": {
        "names": {
          "type": "character",
          "attributes": {},
          "value": ["sp", "w"]
        }
      },
      "value": [
        {
          "type": "character",
          "attributes": {},
          "value": ["Sprat", "Herring", "Cod"]
        },
        {
          "type": "character",
          "attributes": {},
          "value": ["0.001", "0.00119", "0.00142", "0.0017", "0.00203", "0.00242", "0.00289", "0.00345", "0.00411", "0.00491", "0.00586", "0.00699", "0.00834", "0.00995", "0.0119", "0.0142", "0.0169", "0.0202", "0.0241", "0.0288", "0.0343", "0.0409", "0.0489", "0.0583", "0.0696", "0.083", "0.0991", "0.118", "0.141", "0.168", "0.201", "0.24", "0.286", "0.342", "0.408", "0.486", "0.58", "0.693", "0.827", "0.987", "1.18", "1.4", "1.68", "2", "2.39", "2.85", "3.4", "4.06", "4.84", "5.78", "6.9", "8.23", "9.82", "11.7", "14", "16.7", "19.9", "23.8", "28.4", "33.8", "40.4", "48.2", "57.5", "68.7", "81.9", "97.8", "117", "139", "166", "198", "237", "282", "337", "402", "480", "573", "683", "816", "973", "1160", "1390", "1650", "1970", "2360", "2810", "3350", "4000", "4780", "5700", "6800", "8120", "9690", "11600", "13800", "16500", "19600", "23400", "28000", "33400", "39900"]
        }
      ]
    },
    "class": {
      "type": "character",
      "attributes": {},
      "value": ["ArraySpeciesBySize", "matrix", "array"]
    },
    "value_name": {
      "type": "character",
      "attributes": {},
      "value": ["Energy for reproduction"]
    },
    "units": {
      "type": "character",
      "attributes": {},
      "value": ["g/year"]
    },
    "type": {
      "type": "character",
      "attributes": {},
      "value": ["value"]
    },
    "representation": {
      "type": "character",
      "attributes": {},
      "value": ["average"]
    }
  },
  "value": [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 7.76455306e-06, 0, 0, 0.0000557, 0, 0, 0.0003963, 0, 0, 0.00280456, 0, 0, 0.01974809, 0, 23.10928534, 0.13864872, 0, 169.73887122, 0.97128925, 0, 310.55941645, 6.76122629, 0, 525.29220709, 45.81367061, 0, 794.36251051, 270.68858557, 0, 1155.86271992, 992.38888965, 0, 1583.92811532, 1831.75786922, 0, 1978.75743921, 2408.98697451, 0, 2401.39915089, 2922.82765383, 0, 2895.3766748, 3494.24069871, 0, 3370.04761683, 4166.32911037, 0, 3856.77828662, 4965.18873202, 0, 4414.92142164, 5916.60431368, 0, 5032.30150687, 7050.01525121, 0, 5714.68582631, 8400.3125895, 0, 6453.0923513, 10008.97064126, 0, 7268.78028023, 11925.45316006, 0, 8182.34442095, 14208.66651243, 0, 9206.48646854, 16928.77472337, 0, 10350.6444723, 20169.32222793, 0, 11633.42895089, 24029.85821174, 0, 13070.62391409, 28628.9349749, 0, 14684.7597491, 34107.78386028, 0, 16494.02287271, 40634.60792102]
}

getRDI

{
  "type": "double",
  "attributes": {
    "names": {
      "type": "character",
      "attributes": {},
      "value": ["Sprat", "Herring", "Cod"]
    }
  },
  "value": [0, 1.7949261994139792e+20, 2.3806322633951602e+20]
}

getRDD

{
  "type": "double",
  "attributes": {
    "names": {
      "type": "character",
      "attributes": {},
      "value": ["Sprat", "Herring", "Cod"]
    }
  },
  "value": [0, 1109999993135.6511, 8259999999.7134056]
}

getEGrowth is working

{
  "type": "double",
  "attributes": {
    "dim": {
      "type": "integer",
      "attributes": {},
      "value": [3, 100]
    },
    "dimnames": {
      "type": "list",
      "attributes": {
        "names": {
          "type": "character",
          "attributes": {},
          "value": ["sp", "w"]
        }
      },
      "value": [
        {
          "type": "character",
          "attributes": {},
          "value": ["Sprat", "Herring", "Cod"]
        },
        {
          "type": "character",
          "attributes": {},
          "value": ["0.001", "0.00119", "0.00142", "0.0017", "0.00203", "0.00242", "0.00289", "0.00345", "0.00411", "0.00491", "0.00586", "0.00699", "0.00834", "0.00995", "0.0119", "0.0142", "0.0169", "0.0202", "0.0241", "0.0288", "0.0343", "0.0409", "0.0489", "0.0583", "0.0696", "0.083", "0.0991", "0.118", "0.141", "0.168", "0.201", "0.24", "0.286", "0.342", "0.408", "0.486", "0.58", "0.693", "0.827", "0.987", "1.18", "1.4", "1.68", "2", "2.39", "2.85", "3.4", "4.06", "4.84", "5.78", "6.9", "8.23", "9.82", "11.7", "14", "16.7", "19.9", "23.8", "28.4", "33.8", "40.4", "48.2", "57.5", "68.7", "81.9", "97.8", "117", "139", "166", "198", "237", "282", "337", "402", "480", "573", "683", "816", "973", "1160", "1390", "1650", "1970", "2360", "2810", "3350", "4000", "4780", "5700", "6800", "8120", "9690", "11600", "13800", "16500", "19600", "23400", "28000", "33400", "39900"]
        }
      ]
    },
    "class": {
      "type": "character",
      "attributes": {},
      "value": ["ArraySpeciesBySize", "matrix", "array"]
    },
    "value_name": {
      "type": "character",
      "attributes": {},
      "value": ["Growth rate"]
    },
    "units": {
      "type": "character",
      "attributes": {},
      "value": ["g/year"]
    },
    "type": {
      "type": "character",
      "attributes": {},
      "value": ["value"]
    },
    "representation": {
      "type": "character",
      "attributes": {},
      "value": ["point"]
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}

mizer documentation built on Aug. 31, 2026, 5:08 p.m.