Multi-species sIZE spectrum modelling in R

getBiomass-methods | Calculate the total biomass of each species within a size... |

getCommunitySlope-methods | Calculate the slope of the community abundance |

getEGrowth-methods | getEGrowth method for the size based model |

getEReproAndGrowth-methods | getEReproAndGrowth method for the size based model |

getESpawning-methods | getESpawning method for the size based model |

getFeedingLevel-methods | getFeedingLevel method for the size based model |

getFMortGear-methods | Get the fishing mortality by time, gear, species and size |

getFMort-methods | Get the total fishing mortality from all fishing gears by... |

get_initial_n | Calculate initial population abundances for the community... |

getM2Background-methods | getM2Background method for the size based model |

getM2-methods | getM2 method for the size based model |

getMeanMaxWeight-methods | Calculate the mean maximum weight of the community |

getMeanWeight-methods | Calculate the mean weight of the community |

getN-methods | Calculate the total abundance in terms of numbers of species... |

getPhiPrey-methods | getPhiPrey method for the size based model |

getPredRate-methods | getPredRate method for the size based model |

getProportionOfLargeFish-methods | Calculate the proportion of large fish |

getRDD-methods | getRDD method for the size based model |

getRDI-methods | getRDI method for the size based model |

getSSB-methods | Calculate the SSB of species |

getYieldGear-methods | Calculate the total yield per gear and species |

getYield-methods | Calculate the total yield of each species |

getZ-methods | getZ method for the size based model |

inter | Sample interaction data set |

knife_edge | Size based knife-edge selectivity function |

mizer | mizer: Multi-species size-based modelling in R |

MizerParams-class | MizerParams |

MizerParams-methods | Constructors for objects of 'MizerParams' class |

MizerSim-class | MizerSim |

MizerSim-methods | Constructor for the 'MizerSim' class |

NS_species_params | Example parameters data sets |

plotBiomass-methods | Plot the biomass of each species through time |

plotFeedingLevel-methods | Plot the feeding level of each species by size |

plotFMort-methods | Plot total fishing mortality of each species by size |

plotM2-methods | Plot M2 of each species by size |

plot-methods | Summary plot for 'MizerSim' objects |

plotSpectra-methods | Plot the abundance spectra of each species and the background... |

plotYieldGear-methods | Plot the total yield of each species by gear through time |

plotYield-methods | Plot the total yield of each species through time |

project-methods | project method for the size based modelling |

set_community_model | Sets up parameters for a community-type model |

set_trait_model | Sets up parameters for a trait-based model |

sigmoid_length | Length based sigmoid selectivity function |

summary-methods | Summary method |

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