plot.momentuHMMData: Plot 'momentuHMMData' or 'momentuHierHMMData'

In momentuHMM: Maximum Likelihood Analysis of Animal Movement Behavior Using Multivariate Hidden Markov Models

Plot momentuHMMData or momentuHierHMMData

Description

Plot momentuHMMData or momentuHierHMMData

Usage

## S3 method for class 'momentuHMMData'
plot(
  x,
  dataNames = c("step", "angle"),
  animals = NULL,
  compact = FALSE,
  ask = TRUE,
  breaks = "Sturges",
  ...
)

Arguments

x	An object momentuHMMData or momentuHierHMMData
dataNames	Names of the variables to plot. Default is dataNames=c("step","angle").
animals	Vector of indices or IDs of animals for which information will be plotted. Default: NULL ; all animals are plotted.
compact	TRUE for a compact plot (all individuals at once), FALSE otherwise (default – one individual at a time).
ask	If TRUE, the execution pauses between each plot.
breaks	Histogram parameter. See hist documentation.
...	Currently unused. For compatibility with generic method.

Examples

# data is a momentuHMMData object (as returned by prepData), automatically loaded with the package
data <- example$m$data

plot(data,dataNames=c("step","angle","cov1","cov2"),
     compact=TRUE,breaks=20,ask=FALSE)

momentuHMM documentation built on Oct. 19, 2022, 1:07 a.m.