R/data.R

In momr: Mining Metaomics Data (MetaOMineR)

#-----------------------------------------------------
# TEST DATASETS
#-----------------------------------------------------
#' @name hs_3.3_metahit_sample_dat_raw
#' @title hs_3.3_metahit_sample_dat_raw
#' @docType data
#' @author Edi Prifti & Emmanuelle Le Chatelier
#' @keywords test dataset
#' @description this dataset contains only the first 100000 genes of the catalogue for size
#' purposes
NULL

#' @name hs_3.3_metahit_sample_dat_freq
#' @title hs_3.3_metahit_sample_dat_freq
#' @docType data
#' @author Edi Prifti & Emmanuelle Le Chatelier
#' @keywords test dataset
#' @description this dataset contains only the first 100000 genes of the catalogue for size
#' purposes
NULL

#-----------------------------------------------------
# CATALOGUE GENE INFORMATION
#-----------------------------------------------------
#' CATALOG HS_3.3_METAHIT
#' @name hs_3.3_metahit_genesize
#' @title hs_3.3_metahit_genesize
#' @description The gene size for the hs_3.3_metahit catalogue, needed for the normalization procedure
#' @docType data
#' @author Edi Prifti & Emmanuelle Le Chatelier
#' @keywords data gnesize
NULL

#-----------------------------------------------------
# MGS CATALOGUE SECTION
#-----------------------------------------------------
#' @name mgs_hs_3.3_metahit_sup500
#' @title mgs_hs_3.3_metahit_sup500
#' @docType data
#' @author Edi Prifti & Emmanuelle Le Chatelier
#' @keywords mgs catalog
#' @description This is the mgs catalogue of the 3.3 metahit gene catalogue and contains 778 MGS
#' of size greater than 500 genes. It has also been manually curated.
NULL