viterbi: Viterbi algorithm

Description Usage Arguments Value References Examples

View source: R/viterbi.R

Description

For a given model, reconstructs the most probable states sequence, using the Viterbi algorithm.

Usage

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Arguments

m

An object moveHMM

Value

The sequence of most probable states.

References

Zucchini, W. and MacDonald, I.L. 2009. Hidden Markov Models for Time Series: An Introduction Using R. Chapman & Hall (London).

Examples

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# m is a moveHMM object (as returned by fitHMM), automatically loaded with the package
m <- example$m

# reconstruction of states sequence
states <- viterbi(m)

moveHMM documentation built on June 7, 2018, 5:05 p.m.