ISIS: To perform GWAS with ISIS EM-BLASSO method
In mrMLM.GUI: Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for Genome-Wide Association Study with Graphical User Interface

Iterative Sure Independence Screening EM-Bayesian LASSO

1	ISIS(gen,phe,outATCG,genRaw,kk,psmatrix,svpal,svmlod,Genformat,CLO)

`gen`	genotype matrix.
`phe`	phenotype matrix.
`outATCG`	genotype for code 1.
`genRaw`	raw genotype.
`kk`	kinship matrix.
`psmatrix`	population structure matrix.
`svpal`	Critical P-value for selecting variable.
`svmlod`	Critical LOD score for significant QTN.
`Genformat`	Format for genotypic codes.
`CLO`	number of CPU.

Zhang Ya-Wen, Li Pei, and Zhang Yuan-Ming
Maintainer: Yuan-Ming Zhang<soyzhang@mail.hzau.edu.cn>

G1=data(mrgen)
P1=data(mrphe)
G2=data(mrgenraw)
result=ISIS(mrgen,mrphe,outATCG=NULL,mrgenraw,kk=NULL,psmatrix=NULL,
0.01,3,1,CLO=1)

mrMLM.GUI documentation built on Oct. 23, 2020, 8:13 p.m.

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