editmetabolitesmrbin | R Documentation |
This function edits the metabolite list within an mrbin object and returns it
editmetabolitesmrbin(mrbinObject, borders, metabolitenames, add = TRUE)
mrbinObject |
An mrbin object |
borders |
A matrix of signal borders. 1D: two columns: left, right 2D: four columns: left, right, top, bottom |
metabolitenames |
A character vector of metabolite identities |
add |
Should the new metabolite list be added to an existing list, or replace the current list? |
An (invisible) mrbin object
mrbinObject<-mrbin(silent=TRUE, parameters=list(verbose=TRUE,dimension="1D",PQNScaling="No", binwidth1D=0.04,signal_to_noise1D=1,PCA="No",binRegion=c(9.5,0.5,10,156), saveFiles="No",referenceScaling="No",noiseRemoval="No", fixNegatives="No",logTrafo="No",noiseThreshold=.05,tryParallel=FALSE, NMRfolders=c(system.file("extdata/2/10/pdata/10",package="mrbin"), system.file("extdata/3/10/pdata/10",package="mrbin")) )) mrbinObject<-editmetabolitesmrbin(mrbinObject,borders=matrix(c( 1.346,1.324, 3.052,3.043, 4.066,4.059 ),ncol=2,byrow=TRUE),metabolitenames=c( "Lactate", "Creatinine", "Creatinine" )) mrbinObject$parameters$metaboliteIdentities
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