Global functions | |
---|---|
MuleaHypergeometricTest | Man page |
MuleaHypergeometricTest-class | Man page |
SetBasedEnrichmentTest | Man page |
SetBasedEnrichmentTest-class | Man page |
SubramanianTest | Man page |
SubramanianTest-class | Man page |
addExtraParamsToPlt | Source code |
checkIfPoolIncludeSample | Source code |
computeSetBasedTestRes | Source code |
cutGmtToPool | Source code |
do_the_simulation | Source code |
enrichment_test_simulation | Source code |
fillOntologiesGrapgEdge | Source code |
filterRelaxedResultsForPlotting | Source code |
filter_ontology | Man page Source code |
getOntologiesGraphEdgesTemplate | Source code |
gsea | Man page |
gsea-class | Man page |
helper_set_up_namespace_params | Source code |
initialize_result_df | Source code |
list_to_gmt | Man page Source code |
ora | Man page |
ora-class | Man page |
performSetBasedEnrichmentTest | Source code |
performSetBasedEnrichmentTestElse | Source code |
plot_barplot | Man page Source code |
plot_graph | Man page Source code |
plot_heatmap | Man page Source code |
plot_lollipop | Man page Source code |
read_gmt | Man page Source code |
reshape_results | Man page Source code |
run_test | Man page |
run_test,MuleaHypergeometricTest-method | Man page |
run_test,SetBasedEnrichmentTest-method | Man page |
run_test,SubramanianTest-method | Man page |
run_test,gsea-method | Man page |
run_test,ora-method | Man page |
set.based.enrichment.test | Source code |
set.based.enrichment.test.wrapper | Source code |
validate_column_names_and_function_args | Source code |
write_gmt | Man page Source code |
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