nltt_diff_exact_brts: Calculates the exact difference between the nLTT curves of...

In nLTT: Calculate the NLTT Statistic

Calculates the exact difference between the nLTT curves of the branching times

Description

Calculates the exact difference between the nLTT curves of the branching times

Usage

nltt_diff_exact_brts(
  b_times,
  lineages,
  b_times2,
  lineages2,
  distance_method = "abs",
  time_unit = "since"
)

Arguments

b_times	branching times of the first phylogeny,
lineages	the number of lineages, usually one to the number of lineages
b_times2	branching times of the first phylogeny
lineages2	the number of lineages, usually one to the number of lineages
distance_method	how the difference between the two nLTTs is summed "abs: " the absolute distance between the two nLTTs is summed "squ: " the squared distance between the two nLTTs is summed
time_unit	the time unit of the branching times "ago: " the branching times are postive, as these are in time units ago "since: " the branching times are negative, as these are in time units since present

Author(s)

Thijs Janzen and Richèl Bilderbeek

nLTT documentation built on June 8, 2025, 10:56 a.m.