nltts_plot: Get the average nLTT from a collection of phylogenies

In nLTT: Calculate the NLTT Statistic

Get the average nLTT from a collection of phylogenies

Description

Get the average nLTT from a collection of phylogenies

Usage

nltts_plot(
  phylogenies,
  dt = 0.001,
  plot_nltts = FALSE,
  xlab = "Normalized Time",
  ylab = "Normalized Lineages",
  replot = FALSE,
  ...
)

Arguments

phylogenies	a collection of one or more phylogenies, where the phylogenies are of type phylo. This collection can both be a list of phylo or a multiphylo.
dt	The timestep resolution, a value bigger than zero and less or equal to one. 1/dt is the number of points that will be evaluated
plot_nltts	Also plot each nLLT line
xlab	Label on the x axis
ylab	Label on the y axis
replot	If false, start a clean plot. If true, plot the new data over the current
...	Plotting options

Value

Nothing

Author(s)

Richèl J.C. Bilderbeek

Examples

  nltts_plot(c(ape::rcoal(10), ape::rcoal(10)))
  nltts_plot(c(ape::rcoal(10), ape::rcoal(20)), dt = 0.1)

nLTT documentation built on Aug. 21, 2023, 5:13 p.m.