Files in nLTT
Calculate the NLTT Statistic

MD5
NAMESPACE
DESCRIPTION
build/vignette.rds
data/exampleTrees.rda
R/get_norm_n.R R/get_average_nltt_matrix.R R/ABC_SMC.R R/get_branching_times.R R/nLTTDiff.R R/get_norm_brts.R R/get_nltt_values.R R/get_phylogeny_nltt_matrix.R R/stretch_nltt_matrix.R R/nltts_plot.R R/get_n_lineages.R R/plot_nLTT.R vignettes/nltts_plot.Rmd vignettes/stretch_nltt_matrix.Rmd vignettes/get_nltt_values.Rmd vignettes/trees_with_root_edge.Rmd vignettes/nltt_diff.Rmd vignettes/walkthrough.Rmd man/nLTTstat.Rd man/nltts_plot.Rd man/nltt_lines.Rd man/nLTTstat_exact.Rd man/abc_smc_nltt.Rd man/nltt_plot.Rd man/MCMC_nLTT.Rd man/get_branching_times.Rd man/get_n_lineages.Rd man/nltt_diff.Rd man/nltt_diff_exact.Rd man/get_nltt_values.Rd man/get_average_nltt_matrix.Rd man/nltts_diff.Rd man/get_norm_n.Rd man/get_phylogeny_nltt_matrix.Rd man/nLTT-package.Rd man/nltt_diff_exact_brts.Rd man/stretch_nltt_matrix.Rd man/nltt_diff_exact_norm_brts.Rd man/nLTT-internal.Rd man/get_norm_brts.Rd man/exampleTrees.Rd tests/testthat.R tests/testthat/test-nLTTstat.R tests/testthat/test-calculate_weight.R tests/testthat/test-get_phylogeny_nltt_matrix.R tests/testthat/test-nltts_diff.R tests/testthat/test-nltt_diff_exact.R tests/testthat/test-get_nltt_values.R tests/testthat/test-nltt_diff.R tests/testthat/test-get_average_nltt.R tests/testthat/test-get_average_nltt_matrix.R tests/testthat/test-mcmc_nltt.R tests/testthat/test-get_branching_times.R tests/testthat/test-log_transform.R tests/testthat/test-stretch_nltt_matrix.R tests/testthat/test-get_n_lineages.R tests/testthat/test-nltt_plot.R tests/testthat/test-nltts_plot.R tests/testthat/test-nLTTstat_exact.R tests/testthat/test-abc_smc_nltt.R tests/testthat/test-nltt_diff_exact_norm_brts.R tests/testthat/Rplots.pdf inst/doc/nltt_diff.R inst/doc/nltts_plot.Rmd inst/doc/stretch_nltt_matrix.Rmd
inst/doc/get_nltt_values.html
inst/doc/trees_with_root_edge.R
inst/doc/stretch_nltt_matrix.html
inst/doc/nltt_diff.html
inst/doc/walkthrough.R
inst/doc/nltts_plot.html
inst/doc/walkthrough.html
inst/doc/trees_with_root_edge.html
inst/doc/get_nltt_values.R inst/doc/get_nltt_values.Rmd inst/doc/trees_with_root_edge.Rmd inst/doc/stretch_nltt_matrix.R inst/doc/nltts_plot.R inst/doc/nltt_diff.Rmd inst/doc/walkthrough.Rmd
inst/extdata/issue_38.RDa
nLTT documentation built on Jan. 13, 2020, 9:06 a.m.