npdeControl: Set options for an NpdeObject

In npde: Normalised Prediction Distribution Errors for Nonlinear Mixed-Effect Models

Set options for an NpdeObject

Description

Set, replace and check options for an NpdeObject

Usage

npdeControl(boolsave = TRUE, namsav = "output", type.graph = "eps",
verbose = FALSE, calc.npde = TRUE, calc.npd = TRUE, decorr.method = "cholesky",
cens.method = "omit", ties = TRUE, sample = FALSE)

check.control.options(opt)

replace.control.options(opt,...)

replace.control.options(opt, ...)

check.control.options(opt)

Arguments

boolsave	whether to save the results (a file containing the numerical results and a file with the graphs)
namsav	the root name of the files to save to (the file with the results will be named ROOTNAME.npde and the graphs will be saved to ROOTNAME.format where format is given by the type.graph argument)
type.graph	type of graph to save to (one of "eps", "pdf", "jpeg", "png")
verbose	a boolean; if TRUE, a message is printed as the computation of the npde begins for each new subject
calc.npde	a boolean; TRUE to compute npde
calc.npd	a boolean; TRUE to compute npd
decorr.method	the method used to decorrelate simulated and observed data (see npde.decorr.method)
cens.method	the method used to handle censored data (see npde.cens.method)
ties	if FALSE, a smoothing will be applied to prediction discrepancies to avoid ties
sample	if TRUE, the test on the pd will be performed after randomly sampling only pd per subject
opt	a list of control options to be checked
...	named parameters to be changed. The names will be compared to the names of the control variables and changed, with warnings issued for names that do not match.

Value

A list of settings for the computation of pd/npde

npde documentation built on May 29, 2024, 9:59 a.m.