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#######################################################################
# nuggets: An R framework for exploration of patterns in data
# Copyright (C) 2025 Michal Burda
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <https://www.gnu.org/licenses/>.
#######################################################################
.parse_tree_def_from_condition <- function(pred, root_name) {
if (is.null(pred) || length(pred) == 0) {
return(data.frame())
}
empties <- vapply(pred, length, integer(1)) == 0
pred <- pred[!empties]
if (length(pred) == 0) {
return(data.frame())
}
pred <- unlist(pred)
pred <- unique(pred)
pred <- sort(pred)
n <- sub("=.*", "", pred)
v <- sub(".*=", "", pred)
hasEq <- grepl("=", pred)
nid_dict <- unique(n)
nid_dict <- setNames(seq_along(nid_dict), nid_dict)
nid <- paste0("n", nid_dict[n])
vid <- paste0("v", seq_along(pred))
v <- paste0("= ", v)
v[!hasEq] <- NA
vid[!hasEq] <- NA
res <- data.frame(nid = nid, # predicate name ID
vid = vid, # value ID
rid = root_name, # root node name shown
predicate = pred,
name = n, # node name shown
value = v, # sub-node name shown
stringsAsFactors = FALSE)
if (length(pred) > 50) {
prefix <- substr(pred, 1, 1)
prefix <- toupper(prefix)
res$pid <- paste0(prefix, "...")
}
res
}
.create_tree_from_def <- function(def) {
if (is.null(def$pid)) {
lev <- c("rid", "name", "value")
id <- c("rid", "nid", "vid")
} else {
lev <- c("rid", "pid", "name", "value")
id <- c("rid", "pid", "nid", "vid")
}
create_tree(def, levels = lev, levels_id = id)
}
.create_filtering_table <- function(x, pred, def) {
m <- matrix(FALSE, nrow = length(x), ncol = nrow(def))
for (row in seq_along(x)) {
m[row, ] <- def$predicate %in% pred[[row]]
}
m
}
conditionFilterModule <- function(id, x, meta) {
root_name <- "predicate"
pred <- parse_condition(x)
def <- .parse_tree_def_from_condition(pred, root_name = root_name)
tab <- .create_filtering_table(x, pred, def)
tree <- .create_tree_from_def(def)
empty_cond <- vapply(pred, length, integer(1)) == 0
showEmptyCheckbox <- NULL
if (any(empty_cond)) {
showEmptyCheckbox <- checkboxInput(NS(id, "emptyCondition"),
paste0("show empty ", tolower(meta$long_name)),
value = TRUE)
}
list(ui = function() {
tabPanel(title = meta$long_name,
value = paste0(meta$data_name, "-filter-tab"),
infoBox(paste0("Filter the rules by choosing predicates that should appear in the ",
tolower(meta$long_name), ".")),
treeInput(NS(id, "tree"),
label = tolower(meta$long_name),
choices = tree,
selected = root_name,
returnValue = "id",
closeDepth = 1),
radioButtons(NS(id, "radio"),
label = "show rules containing",
choiceNames = c("all selected predicates", "at least one selected predicate"),
choiceValues = c("all", "any"),
selected = "all"),
showEmptyCheckbox,
hr(),
actionButton(NS(id, "resetButton"), "Reset"),
actionButton(NS(id, "resetAllButton"), "Reset all")
)
},
server = function(reset_all_trigger) {
moduleServer(id, function(input, output, session) {
observeEvent(input$resetButton, {
updateTreeInput("tree", selected = def$vid, session = session)
updateRadioButtons("radio", selected = "all", session = session)
if (!is.null(showEmptyCheckbox)) {
updateCheckboxInput("emptyCondition", value = TRUE, session = session)
}
})
observeEvent(input$resetAllButton, {
reset_all_trigger(Sys.time())
})
})
},
filter = function(input) {
treeInput <- input[[NS(id, "tree")]]
radioInput <- input[[NS(id, "radio")]]
emptyInput <- input[[NS(id, "emptyCondition")]]
if (is.null(treeInput) || is.null(radioInput)) {
res <- rep(FALSE, length(x))
} else {
ids <- def$rid %in% treeInput |
def$nid %in% treeInput |
!is.na(def$vid) & def$vid %in% treeInput
res <- tab[, ids, drop = FALSE]
if (radioInput == "all") {
res <- rowSums(res) == rowSums(tab)
} else {
res <- rowSums(res) > 0
}
}
if (!is.null(emptyInput)) {
if (emptyInput) {
res <- res | empty_cond
} else {
res <- res & !empty_cond
}
}
res
},
reset = function(session) {
updateTreeInput(NS(id, "tree"), selected = def$vid, session = session)
updateRadioButtons(NS(id, "radio"), selected = "all", session = session)
if (!is.null(showEmptyCheckbox)) {
updateCheckboxInput(NS(id, "emptyCondition"), value = TRUE, session = session)
}
}
)
}
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