choose_ref_cor: choose beest reference for each cell based on correlation
In numbat: Haplotype-Aware CNV Analysis from scRNA-Seq
choose_ref_cor R Documentation
choose beest reference for each cell based on correlation
Description
choose beest reference for each cell based on correlation
Usage
choose_ref_cor(count_mat, lambdas_ref, gtf)
Arguments
count_mat
dgCMatrix Gene expression counts
lambdas_ref
matrix Reference expression profiles
gtf
dataframe Transcript gtf
Value
named vector Best references for each cell
numbat documentation built on Nov. 5, 2025, 5:31 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| choose_ref_cor | R Documentation |
choose beest reference for each cell based on correlation
Description
choose beest reference for each cell based on correlation
Usage
choose_ref_cor(count_mat, lambdas_ref, gtf)
Arguments
count_mat |
dgCMatrix Gene expression counts |
lambdas_ref |
matrix Reference expression profiles |
gtf |
dataframe Transcript gtf |
Value
named vector Best references for each cell
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.