choose_ref_cor: choose beest reference for each cell based on correlation
In numbat: Haplotype-Aware CNV Analysis from scRNA-Seq
choose_ref_cor R Documentation
choose beest reference for each cell based on correlation
Description
choose beest reference for each cell based on correlation
Usage
choose_ref_cor(count_mat, lambdas_ref, gtf)
Arguments
count_mat
dgCMatrix Gene expression counts
lambdas_ref
matrix Reference expression profiles
gtf
dataframe Transcript gtf
Value
named vector Best references for each cell
numbat documentation built on May 29, 2024, 1:29 a.m.
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| choose_ref_cor | R Documentation |
choose beest reference for each cell based on correlation
Description
choose beest reference for each cell based on correlation
Usage
choose_ref_cor(count_mat, lambdas_ref, gtf)
Arguments
count_mat |
dgCMatrix Gene expression counts |
lambdas_ref |
matrix Reference expression profiles |
gtf |
dataframe Transcript gtf |
Value
named vector Best references for each cell
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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