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Analysis of molecular marker data from model (backcrosses, F2 and recombinant inbred lines) and nonmodel systems (i. e. outcrossing species). For the later, it allows statistical analysis by simultaneously estimating linkage and linkage phases (genetic map construction) according to Wu et al. (2002) <doi:10.1006/tpbi.2002.1577>. All analysis are based on multipoint approaches using hidden Markov models.
Package details 


Author  Gabriel Margarido [aut], Marcelo Mollinari [aut], Cristiane Taniguti [ctb, cre], Getulio Ferreira [ctb], Rodrigo Amadeu [ctb], Karl Broman [ctb], Katharine Preedy [ctb, cph] (MDS ordering algorithm), Bastian Schiffthaler [ctb, cph] (HMM parallelization), Augusto Garcia [aut, ctb] 
Maintainer  Cristiane Taniguti <chtaniguti@tamu.edu> 
License  GPL3 
Version  3.0.0 
URL  https://github.com/augustogarcia/onemap 
Package repository  View on CRAN 
Installation 
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