onemap_example_riself: Simulated data from a RIL population produced by selfing.

In onemap: Construction of Genetic Maps in Experimental Crosses

Simulated data from a RIL population produced by selfing.

Description

Simulated biallelic data set for an ri self population.

Usage

data("onemap_example_riself")

Format

The format is: List of 10 $ geno : num [1:100, 1:68] 3 1 3 1 1 1 1 1 1 1 ... ..- attr(*, "dimnames")=List of 2 .. ..$ : chr [1:100] "ID1" "ID2" "ID3" "ID4" ... .. ..$ : chr [1:68] "M1" "M2" "M3" "M4" ... $ n.ind : int 100 $ n.mar : int 68 $ segr.type : chr [1:68] "A.B" "A.B" "A.B" "A.B" ... $ segr.type.num: logi [1:68] NA NA NA NA NA NA ... $ n.phe : int 0 $ pheno : NULL $ CHROM : NULL $ POS : NULL $ input : chr "onemap_example_riself.raw" - attr(*, "class")= chr [1:2] "onemap" "riself"

Details

A total of 100 F1 individuals were genotyped for 68 markers. The data currently contains only genotype information (no phenotypes). It is included to be used as a reference in order to understand how a data file needs to be.

Author(s)

Cristiane Taniguti, [e-mail]

See Also

read_onemap for details about objects of class onemap.

Examples

data(onemap_example_riself)
plot(onemap_example_riself)

onemap documentation built on Nov. 26, 2022, 9:05 a.m.