table2list: Converts a table to list

In ontoFAST: Interactive Annotation of Characters with Biological Ontologies

Description

Takes a table where each row consists of character ID + an ontology annotation and returns a list. Each character is assigned its own ID CHAR:XXXX

Usage

table2list(table, id_col = c(1), descendants_cols = c(2:ncol(table)))

Arguments

table	A character table with annotations.
id_col	A column ID corresponding to character
descendants_cols	IDs of columns corresponding to character annotations

Value

The list.

Examples

# converting Sharkey_2011 dataset to list of character states
table2list(Sharkey_2011)

ontoFAST documentation built on April 29, 2021, 9:06 a.m.