A_selected: Adjacency Matrix for Orthology Graph
In orthGS: Orthology vs Paralogy Relationships among Glutamine Synthetase from Plants
A_selected R Documentation
Adjacency Matrix for Orthology Graph
Description
155 x 155 square matrix (155 GS proteins from 45 seed plant species)
Usage
A_selected
Format
A matrix with 155 rows and 155 columns
Source
It has been generated using the function orthG::mapTrees()
and the reconciliation output file 'selected'.
Verbigracia: orthG::mapTrees('./inst/extdata/selected')
The reconciliation was carried out using RANGER-DTL with parameters D = 1, T = 10 and L = 1.
orthGS documentation built on June 8, 2025, 12:37 p.m.
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| A_selected | R Documentation |
Adjacency Matrix for Orthology Graph
Description
155 x 155 square matrix (155 GS proteins from 45 seed plant species)
Usage
A_selected
Format
A matrix with 155 rows and 155 columns
Source
It has been generated using the function orthG::mapTrees() and the reconciliation output file 'selected'. Verbigracia: orthG::mapTrees('./inst/extdata/selected') The reconciliation was carried out using RANGER-DTL with parameters D = 1, T = 10 and L = 1.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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