AngGym: Angiosperms Gymnosperms

In orthGS: Orthology vs Paralogy Relationships among Glutamine Synthetase from Plants

Angiosperms Gymnosperms

Description

Angiosperms Gymnosperms

Usage

AngGym

Format

A dataframe with 155 rows (GS proteins) and 10 columns:

n

Reference number

phylo_id

Unique identification label of the protein/gen

species

Species

taxon

Acrogymnospermae or Angiospermae

class

Angiosperms: Amborellopsida, Liliopsida, Magnoliopsida; Gymnosperms: Ginkgoopsida, Cycadopsida, Gnetopsida, Pinopsida

dna

CDS sequence

prot

Protein sequence

short

Unique three letter identification of the species

gsLineage

Either GS2, GS1a or GS1b

plant_group

Primitive angiosperms, Modern angiosperms, Ginkgo-Cycadales, Gnetales, Pinacea, Conifer II

Source

It has been manually curated by the authors

orthGS documentation built on June 8, 2025, 12:37 p.m.