agf: Angiosperms Gymnosperms Ferns

In orthGS: Orthology vs Paralogy Relationships among Glutamine Synthetase from Plants

Angiosperms Gymnosperms Ferns

Description

Angiosperms Gymnosperms Ferns

Usage

agf

Format

A dataframe with 275 rows (GS proteins) and 23 columns:

n

Reference number

phylo_id

Unique identification label of the protein/gen

species

Species

taxon

Acrogymnospermae, Angiospermae, Polypodiopsida

dna

CDS sequence

prot

Protein sequence

short

Unique three letter identification of the species

gs

GS2, GS1a or GS1b_Ang, GS1b_Gym

pI

isoelectric point

factor

Ferns, GS2, GS1a, GS1b_Ang, GS1b_Gym

size

number of residues

CSpos

position signal

prediction

prediction

Lk_SP

seq pep

Lk_mTP

mit

Lk_cTP

chl

Lk_Thylak

thy

secAa

amino acid at position 2

core

core

dabase

db

acc

acc

up_id

uniprot

note

note

Source

It has been manually curated by the authors

orthGS documentation built on June 8, 2025, 12:37 p.m.