NEWS.md

In pafr: Read, Manipulate and Visualize 'Pairwise mApping Format' Data

pafr 0.0.2

• First CRAN releases.
• Parsing of tags in paf files speed up considerably.
• Added options to read paf files while skipping tags, or convert data.frames to pafr objects.
• highlight functions for dotplots no longer require the ordering and alignment arguments to be duplicated from the parent plot.
• Added tests and more documentation examples

pafr 0.0.1

• First (pre-)release level package
• contains core functions for reading paf alignments, producing dotplots with flexible ordering of sequences and 'coverage' and 'synteny' plots to visualize alignments
• Exported functions all have function-level documentation with examples
• Includes Vignette descirbin the data format and plots

pafr documentation built on Dec. 8, 2020, 5:06 p.m.