score.cells.nb1: Score cells after standardising the expression of each gene...
In pagoda2: Single Cell Analysis and Differential Expression
score.cells.nb1 R Documentation
Score cells after standardising the expression of each gene removing outliers
Description
Score cells after standardising the expression of each gene removing outliers
Usage
score.cells.nb1(data, signature, quantile.cutoff = 0.01)
Arguments
data
matrix of expression, rows are cell, columns are genes
signature
a character vector of genes to use in the signature
quantile.cutoff
numeric The quantile extremes to trim before plotting (default=0.0.1)
Value
The filtered subset of gene signatures
pagoda2 documentation built on June 24, 2024, 9:09 a.m.
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| score.cells.nb1 | R Documentation |
Score cells after standardising the expression of each gene removing outliers
Description
Score cells after standardising the expression of each gene removing outliers
Usage
score.cells.nb1(data, signature, quantile.cutoff = 0.01)
Arguments
data |
matrix of expression, rows are cell, columns are genes |
signature |
a character vector of genes to use in the signature |
quantile.cutoff |
numeric The quantile extremes to trim before plotting (default=0.0.1) |
Value
The filtered subset of gene signatures
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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