plot.paleoTS: Plots paleoTS objects

In paleoTS: Analyze Paleontological Time-Series

Description

Plots paleontological time series, showing trait means (with error bars) over time.

Usage

## S3 method for class 'paleoTS'
plot(x, nse = 1, pool = FALSE, add = FALSE, modelFit=NULL, 
                       pch=19, lwd=1.5, ylim=NULL, ...)

Arguments

x	a paleoTS object
nse	size of error bars, in standard errors
pool	logical, indicating if should pool variances among samples in computing standard errors for plotting
add	logical, if TRUE data are added to existing plot
modelFit	optional paleoTSfit object with model fit results to add to plot
pch	plotting symbol
lwd	line width for plotting
ylim	y limit for plotting (optional)
...	other arguments sent to plot

Details

If modelFit is not NULL, then modelCurves will be used to generate and plot the expectations and 95 percent probability interval of that model.

Value

No values are returned, the results are plotted.

Author(s)

Gene Hunt

See Also

as.paleoTS, modelCurves

Examples

y <- sim.GRW(50, 0, 1)
plot(y)
ys <- sub.paleoTS(y, k=0.2)		# same sequence, sub-sampled
plot (ys, add=TRUE, col="red")

paleoTS documentation built on May 29, 2017, 11:28 p.m.

Analysis of evolutionary time-series

paleoTS index

Simulate time-series that tracks a covariate