toyped: Toy pedigree for linkage analysis
In paramlink: Parametric Linkage and Other Pedigree Analysis in R
toyped R Documentation
Toy pedigree for linkage analysis
Description
Toy pedigree with 4 individuals typed at a single SNP marker. Individual 1 is
missing one allele.
Usage
toyped
Format
A data frame with 4 rows and 8 columns
Details
The format is standard LINKAGE (pre-makeped) format, with columns as follows:
FAMID. Family ID
ID. Individual ID
FID. Father ID
MID. Mother ID
SEX. Gender (male=1, female=2)
AFF. Affection status (unaffected=1, affected=2, unknown=0)
M_A1. First allele of marker 1
M_A2. Second allele of marker 1
Examples
toyped
linkdat(toyped)
paramlink documentation built on April 15, 2022, 9:06 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| toyped | R Documentation |
Toy pedigree for linkage analysis
Description
Toy pedigree with 4 individuals typed at a single SNP marker. Individual 1 is missing one allele.
Usage
toyped
Format
A data frame with 4 rows and 8 columns
Details
The format is standard LINKAGE (pre-makeped) format, with columns as follows:
FAMID. Family ID
ID. Individual ID
FID. Father ID
MID. Mother ID
SEX. Gender (male=1, female=2)
AFF. Affection status (unaffected=1, affected=2, unknown=0)
M_A1. First allele of marker 1
M_A2. Second allele of marker 1
Examples
toyped linkdat(toyped)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.