create_HTML_report: Create HTML Report of pathfindR Results

In pathfindR: Enrichment Analysis Utilizing Active Subnetworks

Create HTML Report of pathfindR Results

Description

Create HTML Report of pathfindR Results

Usage

create_HTML_report(input, input_processed, final_res, dir_for_report)

Arguments

input	the input data that pathfindR uses. The input must be a data frame with three columns: Gene Symbol (Gene Symbol) Change value, e.g. log(fold change) (OPTIONAL) p value, e.g. adjusted p value associated with differential expression
input_processed	processed input data frame
final_res	final pathfindR result data frame
dir_for_report	directory to render the report in

pathfindR documentation built on Oct. 9, 2023, 1:07 a.m.