get_kegg_gsets: Retrieve Organism-specific KEGG Pathway Gene Sets
In pathfindR: Enrichment Analysis Utilizing Active Subnetworks
View source: R/data_generation.R
get_kegg_gsets R Documentation
Retrieve Organism-specific KEGG Pathway Gene Sets
Description
Retrieve Organism-specific KEGG Pathway Gene Sets
Usage
get_kegg_gsets(org_code = "hsa")
Arguments
org_code
KEGG organism code for the selected organism. For a full list
of all available organisms, see https://www.genome.jp/kegg/catalog/org_list.html
Value
list containing 2 elements:
gene_setsA list containing the genes involved in each KEGG pathway
descriptionsA named vector containing the descriptions for each KEGG pathway
pathfindR documentation built on Oct. 9, 2023, 1:07 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/data_generation.R
| get_kegg_gsets | R Documentation |
Retrieve Organism-specific KEGG Pathway Gene Sets
Description
Retrieve Organism-specific KEGG Pathway Gene Sets
Usage
get_kegg_gsets(org_code = "hsa")
Arguments
org_code |
KEGG organism code for the selected organism. For a full list of all available organisms, see https://www.genome.jp/kegg/catalog/org_list.html |
Value
list containing 2 elements:
gene_setsA list containing the genes involved in each KEGG pathway
descriptionsA named vector containing the descriptions for each KEGG pathway
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.